TF_ChIP-seq_ENCSR000DOG
TF_ChIP-seq ENCSR000DOG [biosample_summary="Homo sapiens K562" and target="ATF3"]
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| Id: | TF_ChIP-seq/ENCSR000DOG |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR000DOG [biosamplesummary="Homo sapiens K562" and target="ATF3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN537CID|/analyses/ENCAN537CID/} has in progress subobject document {973e4e25-ece7-4879-8bbc-33ed41dc5642|/documents/973e4e25-ece7-4879-8bbc-33ed41dc5642/} audit_internal_action: Released analysis {ENCAN537CID|/analyses/ENCAN537CID/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_not_compliant: Processed alignments file {ENCFF751FSM|/files/ENCFF751FSM/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 5816967 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting ATF3-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) audit_not_compliant: Processed alignments file {ENCFF520TBQ|/files/ENCFF520TBQ/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 9334920 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting ATF3-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000DOG | float |
TF_ChIP-seq_ENCSR000DOG |
TF_ChIP-seq ENCSR000DOG [biosample_summary="Homo sapiens K562" and target="ATF3"]
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[3.06, 251] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF895RNS.bed.gz | 22.01 KB | 7dab414cf6f9671e0e922f75284c07d2 |
| ENCFF895RNS.bed.gz.dvc | 99.0 B | 98d13b027c0075da1663a7907db95996 |
| ENCFF895RNS.tabix.bed.gz | 14.95 KB | 56db91c5aaba330cd7939893b10923f6 |
| ENCFF895RNS.tabix.bed.gz.dvc | 105.0 B | f037ded86b484a83a39796d25770edf0 |
| ENCFF895RNS.tabix.bed.gz.tbi | 17.06 KB | 8fea02a28875bef1abc181c1c761190b |
| ENCFF895RNS.tabix.bed.gz.tbi.dvc | 109.0 B | 68ebd82c54df13da18770f9f0f868343 |
| genomic_resource.yaml | 2.57 KB | 226ab65425c6fee64533b7cded27c501 |
| genomic_resource_original.yaml | 2.47 KB | 0e13243e3be7d38242ecd318afe56030 |
| statistics/ |