| Id: | TF_ChIP-seq/ENCSR000BUZ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR000BUZ [biosamplesummary="Homo sapiens MCF-7" and target="PML"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN083DEW|/analyses/ENCAN083DEW/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_internal_action: Released analysis {ENCAN083DEW|/analyses/ENCAN083DEW/} has in progress subobject document {b6039077-f9c4-4979-92b0-8b983b251649|/documents/b6039077-f9c4-4979-92b0-8b983b251649/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF569JWM|/files/ENCFF569JWM/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline have a rescue ratio of 1.20 and a self consistency ratio of 3.01. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000BUZ | float |
TF_ChIP-seq_ENCSR000BUZ |
TF_ChIP-seq ENCSR000BUZ [biosample_summary="Homo sapiens MCF-7" and target="PML"]
|
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[6.16, 383] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF569JWM.bed.gz | 213.07 KB | 426cfafb0a5ccc7fe84c5ce2ce0746e7 |
| ENCFF569JWM.bed.gz.dvc | 100.0 B | fa7af1980163205f62a60e4ece9fcd83 |
| ENCFF569JWM.tabix.bed.gz | 160.24 KB | 252c351597b1b99351a21a87f63f2b0d |
| ENCFF569JWM.tabix.bed.gz.dvc | 106.0 B | a3b13206e1af681e3b1ea8ed7f61c133 |
| ENCFF569JWM.tabix.bed.gz.tbi | 75.04 KB | c1bc1ab3e72e7b9ab637cf079a928393 |
| ENCFF569JWM.tabix.bed.gz.tbi.dvc | 109.0 B | d49852dd251fec2ddfd20e972c550ac4 |
| genomic_resource.yaml | 2.09 KB | da57ea08695552f45beeda49f1cfa77f |
| genomic_resource_original.yaml | 2.0 KB | b34cf83e41df510b6dbe05dcacedf6ad |
| statistics/ |