| Id: | TF_ChIP-seq/ENCSR000BTI |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR000BTI [biosamplesummary="Homo sapiens A549" and target="GATA3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN244LYI|/analyses/ENCAN244LYI/} has in progress subobject document {45b48f65-5cbc-4634-94f8-99f8551f4896|/documents/45b48f65-5cbc-4634-94f8-99f8551f4896/} audit_internal_action: Released analysis {ENCAN244LYI|/analyses/ENCAN244LYI/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF517TKD|/files/ENCFF517TKD/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline have a rescue ratio of 1.44 and a self consistency ratio of 2.90. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000BTI | float |
TF_ChIP-seq_ENCSR000BTI |
TF_ChIP-seq ENCSR000BTI [biosample_summary="Homo sapiens A549" and target="GATA3"]
|
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[6.11, 587] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF517TKD.bed.gz | 412.76 KB | cadeb10905b7b949dda0efc955e1c63d |
| ENCFF517TKD.bed.gz.dvc | 100.0 B | 51e43e28b4cbd85183ef35c091fb03d4 |
| ENCFF517TKD.tabix.bed.gz | 291.0 KB | b186c5148d59ca08352525dc55815097 |
| ENCFF517TKD.tabix.bed.gz.dvc | 106.0 B | 33f467e13851126dcee7c61a924138a5 |
| ENCFF517TKD.tabix.bed.gz.tbi | 133.25 KB | 56d6058a6e1ce9f3fe8f28809cf3dbe4 |
| ENCFF517TKD.tabix.bed.gz.tbi.dvc | 110.0 B | 3d79e0ff2c16c584cf88b2fa5d512a5a |
| genomic_resource.yaml | 2.1 KB | 7c50c9609076cd770807c6c4e876e98e |
| genomic_resource_original.yaml | 2.0 KB | 294b89b5eb0aec6705d189899c81f5b4 |
| statistics/ |