Resource

Id TF_ChIP-seq/ENCSR000BTEcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BTE [biosample_summary="Homo sapiens HCT116" and target="FOSL1"]
Description
Labels
  • accession: ENCSR000BTE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002824/
  • biosample_summary: Homo sapiens HCT116
  • date_created: 2013-12-19T20:51:26.761870+00:00
  • date_released: 2012-09-10
  • doi: 10.17989/ENCSR000BTE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: FOSL1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BTE float

TF_ChIP-seq_ENCSR000BTE
TF_ChIP-seq ENCSR000BTE [biosample_summary="Homo sapiens HCT116" and target="FOSL1"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000BTE [4.8, 575]
n
9,072,486
mean
61.6
sd
61.8

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 90724860.28% 28691
chr1 903828 0.36% 2835
chr2 821698 0.34% 2641
chr3 653493 0.33% 2102
chr4 582066 0.31% 1847
chr5 482836 0.27% 1515
chr6 692686 0.41% 2187
chr7 484098 0.30% 1542
chr8 467035 0.32% 1510
chr9 348369 0.25% 1084
chr10 521787 0.39% 1657
chr11 402172 0.30% 1265
chr12 528291 0.40% 1689
chr13 179748 0.16% 541
chr14 234910 0.22% 724
chr15 231844 0.23% 717
chr16 229754 0.25% 737
chr17 356703 0.43% 1151
chr18 182775 0.23% 573
chr19 176670 0.30% 568
chr20 210534 0.33% 654
chr21 56531 0.12% 174
chr22 127290 0.25% 384
chrX 196576 0.13% 592
chrY 792 <0.01% 2
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 28691 2 1161 316.21 396
global segment-length histogram

Files

Filename Size md5
ENCFF936WPZ.bed.gz 454.88 KB 454f90846a2092255a965f41b52ded5f
ENCFF936WPZ.tabix.bed.gz 335.02 KB 46adb6d35b721cfe3322cde0705824d9
ENCFF936WPZ.tabix.bed.gz.tbi 165.47 KB 912ecb448b579a4e66966c2ffee05c17
genomic_resource.yaml 2.06 KB 6f95b8e6961137a24c49071df9a8abb1
statistics/