Resource

Id TF_ChIP-seq/ENCSR000BSScontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BSS [biosample_summary="Homo sapiens MCF-7" and target="ELF1"]
Description
Labels
  • accession: ENCSR000BSS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0001203/
  • biosample_summary: Homo sapiens MCF-7
  • date_created: 2013-12-12T06:34:16.008505+00:00
  • date_released: 2012-09-10
  • doi: 10.17989/ENCSR000BSS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: ELF1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BSS float

TF_ChIP-seq_ENCSR000BSS

TF_ChIP-seq ENCSR000BSS [biosample_summary="Homo sapiens MCF-7" and target="ELF1"]
HISTOGRAM FOR TF_ChIP-seq_ENCSR000BSS [5.05, 662]
n
6,963,884
mean
57
sd
63.6

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 69638840.22% 22866
chr1 617968 0.25% 2031
chr2 500806 0.21% 1629
chr3 415238 0.21% 1351
chr4 163450 0.09% 530
chr5 358506 0.20% 1161
chr6 395838 0.23% 1266
chr7 374378 0.23% 1218
chr8 336353 0.23% 1107
chr9 311851 0.23% 1004
chr10 311452 0.23% 991
chr11 292589 0.22% 976
chr12 357525 0.27% 1176
chr13 91601 0.08% 303
chr14 381947 0.36% 1268
chr15 243747 0.24% 793
chr16 326325 0.36% 1094
chr17 409999 0.49% 1365
chr18 62418 0.08% 207
chr19 366402 0.63% 1238
chr20 328232 0.51% 1098
chr21 84629 0.18% 285
chr22 120383 0.24% 402
chrX 112247 0.07% 373
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 22866 2 899 304.55 390
global segment-length histogram

Files

Filename Size md5
ENCFF091NQE.bed.gz 371.42 KB 11aac8e168d26dbfdc49637ca1d86629
ENCFF091NQE.tabix.bed.gz 265.91 KB 666f2713b7ec0cdd840d4f2e85322685
ENCFF091NQE.tabix.bed.gz.tbi 135.36 KB 1446ea586cc4fcba57f6c31d5c813d62
genomic_resource.yaml 2.05 KB e1dde898c2538d3d99387886fd1ed52a
statistics/