Resource

Id TF_ChIP-seq/ENCSR000BSNcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BSN [biosample_summary="Homo sapiens H1" and target="CREB1"]
Description
Labels
  • accession: ENCSR000BSN
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003042/
  • biosample_summary: Homo sapiens H1
  • date_created: 2013-12-12T06:34:08.183584+00:00
  • date_released: 2012-09-10
  • doi: 10.17989/ENCSR000BSN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: CREB1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BSN float

TF_ChIP-seq_ENCSR000BSN

TF_ChIP-seq ENCSR000BSN [biosample_summary="Homo sapiens H1" and target="CREB1"]
HISTOGRAM FOR TF_ChIP-seq_ENCSR000BSN [5.98, 692]
n
5,780,654
mean
68.7
sd
91.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 57806540.18% 20964
chr1 583473 0.23% 2127
chr2 371638 0.15% 1368
chr3 322504 0.16% 1161
chr4 210645 0.11% 769
chr5 265199 0.15% 961
chr6 336434 0.20% 1219
chr7 283380 0.18% 1025
chr8 216063 0.15% 786
chr9 244604 0.18% 886
chr10 238553 0.18% 854
chr11 329958 0.24% 1178
chr12 301654 0.23% 1068
chr13 103580 0.09% 380
chr14 175740 0.16% 651
chr15 182314 0.18% 660
chr16 257785 0.29% 933
chr17 359904 0.43% 1316
chr18 90509 0.11% 321
chr19 458095 0.78% 1671
chr20 163076 0.25% 598
chr21 49599 0.11% 180
chr22 140795 0.28% 496
chrX 94850 0.06% 355
chrY 302 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 20964 1 1629 275.74 320
global segment-length histogram

Files

Filename Size md5
ENCFF978KGB.bed.gz 349.64 KB fc8296ce9b1cd964d7b121db26f0d5a9
ENCFF978KGB.tabix.bed.gz 244.84 KB 81106fc221b0b821b4a42761f4f06ce7
ENCFF978KGB.tabix.bed.gz.tbi 135.04 KB c1a74efcf06c99fcd53c4e85c0cb38f7
genomic_resource.yaml 1.55 KB 49e74356bc4f440da1dd9e53f779d956
statistics/