Resource

Id TF_ChIP-seq/ENCSR000BSLcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BSL [biosample_summary="Homo sapiens SK-N-SH" and target="TCF12"]
Description
Labels
  • accession: ENCSR000BSL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003072/
  • biosample_summary: Homo sapiens SK-N-SH
  • date_created: 2013-09-13T16:54:31.999546-08:00
  • date_released: 2012-09-10
  • doi: 10.17989/ENCSR000BSL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: TCF12

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BSL float

TF_ChIP-seq_ENCSR000BSL
TF_ChIP-seq ENCSR000BSL [biosample_summary="Homo sapiens SK-N-SH" and target="TCF12"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000BSL [7.15, 586]
n
21,057,251
mean
87.7
sd
80.7

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 210572510.65% 67083
chr1 2016131 0.81% 6468
chr2 1966622 0.81% 6195
chr3 1541219 0.78% 4960
chr4 1175179 0.62% 3764
chr5 1415345 0.78% 4474
chr6 1250278 0.73% 3989
chr7 1374187 0.86% 4332
chr8 982039 0.68% 3122
chr9 899324 0.65% 2891
chr10 1089205 0.81% 3477
chr11 1031360 0.76% 3304
chr12 1064811 0.80% 3389
chr13 658584 0.58% 2112
chr14 566300 0.53% 1808
chr15 666746 0.65% 2125
chr16 476054 0.53% 1534
chr17 815161 0.98% 2593
chr18 476114 0.59% 1522
chr19 300994 0.51% 938
chr20 444464 0.69% 1397
chr21 204716 0.44% 661
chr22 233477 0.46% 750
chrX 408941 0.26% 1278
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 67083 1 1095 313.9 390
global segment-length histogram

Files

Filename Size md5
ENCFF258AZW.bed.gz 1.05 MB fd687eb760cc8d255e42f58e93c043b2
ENCFF258AZW.tabix.bed.gz 781.96 KB 572cf750a06a1821e11bcb09018f143e
ENCFF258AZW.tabix.bed.gz.tbi 299.04 KB 4315ddfb22a03271833751494c027296
genomic_resource.yaml 1.56 KB 0f5afa403b4dd669e6985c27139ce9ae
statistics/