Resource

Id TF_ChIP-seq/ENCSR000BSHcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BSH [biosample_summary="Homo sapiens HCT116" and target="MAX"]
Description
Labels
  • accession: ENCSR000BSH
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002824/
  • biosample_summary: Homo sapiens HCT116
  • date_created: 2013-12-19T20:51:54.151332+00:00
  • date_released: 2012-09-10
  • doi: 10.17989/ENCSR000BSH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: MAX

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BSH float

TF_ChIP-seq_ENCSR000BSH
TF_ChIP-seq ENCSR000BSH [biosample_summary="Homo sapiens HCT116" and target="MAX"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000BSH [6.44, 647]
n
14,244,028
mean
56.1
sd
51

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 142440280.44% 40157
chr1 1442433 0.58% 4103
chr2 1173529 0.48% 3315
chr3 853525 0.43% 2396
chr4 641322 0.34% 1749
chr5 635342 0.35% 1732
chr6 961029 0.56% 2707
chr7 684585 0.43% 1913
chr8 665217 0.46% 1862
chr9 494878 0.36% 1369
chr10 766878 0.57% 2151
chr11 712413 0.53% 2006
chr12 815444 0.61% 2348
chr13 221179 0.19% 607
chr14 400316 0.37% 1130
chr15 406895 0.40% 1136
chr16 508957 0.56% 1500
chr17 873798 1.05% 2540
chr18 225304 0.28% 602
chr19 764826 1.30% 2234
chr20 365120 0.57% 1030
chr21 89045 0.19% 238
chr22 297113 0.58% 829
chrX 244880 0.16% 660
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 40157 1 673 354.71 342
global segment-length histogram

Files

Filename Size md5
ENCFF214KLO.bed.gz 586.12 KB b5a64a54826d32accf81c308fbf896f0
ENCFF214KLO.tabix.bed.gz 461.52 KB 3b74c7fe5f1b4d31ef8bb613202a82b0
ENCFF214KLO.tabix.bed.gz.tbi 175.66 KB 2b5a52fadedce4dcfa283b8c33774c36
genomic_resource.yaml 1.55 KB d86ddc29e1a2dc2833417a308c4e0bef
statistics/