TF_ChIP-seq_ENCSR000BRT
TF_ChIP-seq ENCSR000BRT [biosample_summary="Homo sapiens K562" and target="CBX3"]
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| Id: | TF_ChIP-seq/ENCSR000BRT |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR000BRT [biosamplesummary="Homo sapiens K562" and target="CBX3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN559WIS|/analyses/ENCAN559WIS/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF386ZWO|/files/ENCFF386ZWO/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline have a rescue ratio of 1.44 and a self consistency ratio of 2.52. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000BRT | float |
TF_ChIP-seq_ENCSR000BRT |
TF_ChIP-seq ENCSR000BRT [biosample_summary="Homo sapiens K562" and target="CBX3"]
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[8.24, 343] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF386ZWO.bed.gz | 451.81 KB | c74490c82289504baef23da490560cd4 |
| ENCFF386ZWO.bed.gz.dvc | 100.0 B | 25e369cf9d107e9b8b5721fa4b06be36 |
| ENCFF386ZWO.tabix.bed.gz | 314.74 KB | 17691a4e96c22120f92371927c081fef |
| ENCFF386ZWO.tabix.bed.gz.dvc | 106.0 B | ae7a5adc6835c2afd1de9523a83295e2 |
| ENCFF386ZWO.tabix.bed.gz.tbi | 148.92 KB | 38f6a1e56854a8c45f66ed4d17b7c0d3 |
| ENCFF386ZWO.tabix.bed.gz.tbi.dvc | 110.0 B | 8577b66ca5c77234243c35e5caa225a6 |
| genomic_resource.yaml | 1.87 KB | 2fffdc086f3b7b461a9e32c66b41c855 |
| genomic_resource_original.yaml | 1.78 KB | bfe8bd703c45c4feaaea1687aaff7f6c |
| statistics/ |