| Id: | TF_ChIP-seq/ENCSR000BRR |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR000BRR [biosamplesummary="Homo sapiens K562" and target="STAT5A"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN196IUB|/analyses/ENCAN196IUB/} has in progress subobject document {24e0e6bd-bfbb-4fcd-a9c4-6234f0f634e6|/documents/24e0e6bd-bfbb-4fcd-a9c4-6234f0f634e6/} audit_internal_action: Released analysis {ENCAN196IUB|/analyses/ENCAN196IUB/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF187BVL|/files/ENCFF187BVL/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline have a rescue ratio of 1.34 and a self consistency ratio of 2.02. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000BRR | float |
TF_ChIP-seq_ENCSR000BRR |
TF_ChIP-seq ENCSR000BRR [biosample_summary="Homo sapiens K562" and target="STAT5A"]
|
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[7.08, 599] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF187BVL.bed.gz | 220.4 KB | abe228df0cb99f1aa79de79b2a7ad86e |
| ENCFF187BVL.bed.gz.dvc | 100.0 B | d3d89bffa908c91ffadd0fcbb4947ec6 |
| ENCFF187BVL.tabix.bed.gz | 162.73 KB | effc2cef7335c168a892efe33142e985 |
| ENCFF187BVL.tabix.bed.gz.dvc | 106.0 B | b94ab4e7075c2b64ec3003bd14a3338d |
| ENCFF187BVL.tabix.bed.gz.tbi | 97.46 KB | e38b44e01dea9f7ef10e321bbd299128 |
| ENCFF187BVL.tabix.bed.gz.tbi.dvc | 109.0 B | c136ecfae6d4658178be8ed02450e5f1 |
| genomic_resource.yaml | 2.1 KB | fe9cced521952e794992b783fe618200 |
| genomic_resource_original.yaml | 2.0 KB | eed7761082dacd6b271d4a5cca652d57 |
| statistics/ |