Resource

Id TF_ChIP-seq/ENCSR000BROcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BRO [biosample_summary="Homo sapiens HepG2" and target="MYBL2"]
Description
Labels
  • accession: ENCSR000BRO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0001187/
  • biosample_summary: Homo sapiens HepG2
  • date_created: 2013-09-13T16:01:28.608308-08:00
  • date_released: 2012-02-29
  • doi: 10.17989/ENCSR000BRO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: MYBL2

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BRO float

TF_ChIP-seq_ENCSR000BRO
TF_ChIP-seq ENCSR000BRO [biosample_summary="Homo sapiens HepG2" and target="MYBL2"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000BRO [7.22, 333]
n
9,658,646
mean
42
sd
23.9

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 96586460.30% 24333
chr1 800687 0.32% 1972
chr2 1271838 0.53% 3366
chr3 637142 0.32% 1562
chr4 378566 0.20% 926
chr5 446280 0.25% 1103
chr6 879996 0.52% 2325
chr7 440457 0.28% 1048
chr8 347351 0.24% 841
chr9 293843 0.21% 691
chr10 398326 0.30% 989
chr11 400214 0.30% 978
chr12 443052 0.33% 1116
chr13 159755 0.14% 374
chr14 345065 0.32% 896
chr15 194885 0.19% 468
chr16 460510 0.51% 1176
chr17 575226 0.69% 1507
chr18 167179 0.21% 404
chr19 285370 0.49% 736
chr20 430225 0.67% 1136
chr21 69050 0.15% 172
chr22 130884 0.26% 314
chrX 102145 0.07% 232
chrY 600 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 24333 1 913 396.94 384
global segment-length histogram

Files

Filename Size md5
ENCFF712RNF.bed.gz 353.82 KB 3dd1b9bee5e723a4668964341d9db8ee
ENCFF712RNF.tabix.bed.gz 277.57 KB cfe8153e465f728baadfd2e008644602
ENCFF712RNF.tabix.bed.gz.tbi 105.78 KB ff47125a7944293d495f796f4525b968
genomic_resource.yaml 2.1 KB 222e34e2902f7c47c7a1b9ece09a316e
statistics/