TF_ChIP-seq_ENCSR000BRG
TF_ChIP-seq ENCSR000BRG [biosample_summary="Homo sapiens GM12878" and target="EGR1"]
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| Id: | TF_ChIP-seq/ENCSR000BRG |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR000BRG [biosamplesummary="Homo sapiens GM12878" and target="EGR1"] |
| Description: |
status: released biological_replicates: Rep 3 summary: output_type: pseudoreplicated IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN615KOA|/analyses/ENCAN615KOA/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_warning: Processed alignments file {ENCFF436AVX|/files/ENCFF436AVX/} processed by ChIP-seq ENCODE3 hg19 pipeline has 13449473 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting EGR1-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000BRG | float |
TF_ChIP-seq_ENCSR000BRG |
TF_ChIP-seq ENCSR000BRG [biosample_summary="Homo sapiens GM12878" and target="EGR1"]
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[2.77, 254] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF618EFD.bed.gz | 47.79 KB | 5086b8288dcbb4e9f5152cf6c7338a68 |
| ENCFF618EFD.bed.gz.dvc | 99.0 B | a9de23ea672de4642bbb1fd07b0072c0 |
| ENCFF618EFD.tabix.bed.gz | 33.32 KB | cae6c528fe71c22a1e4b64cac1d21fac |
| ENCFF618EFD.tabix.bed.gz.dvc | 105.0 B | 32e7bff0c3deb01dcb21b993e33ce9b0 |
| ENCFF618EFD.tabix.bed.gz.tbi | 29.85 KB | 734241befea874d85a52b7215e792fe2 |
| ENCFF618EFD.tabix.bed.gz.tbi.dvc | 109.0 B | 0133e7c36cc5d34564288e60bd2e542a |
| genomic_resource.yaml | 1.85 KB | a687c58f57f85ae8ea783268e2d7818e |
| genomic_resource_original.yaml | 1.75 KB | d78555b254ec4ee88c6bbacbe8219706 |
| statistics/ |