Resource
| Id | TF_ChIP-seq/ENCSR000BQV |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | TF_ChIP-seq ENCSR000BQV [biosample_summary="Homo sapiens H1" and target="SP4"] |
| Description |
status: archived biological_replicates: summary: output_type: optimal IDR thresholded peaks audit_internal_action: derived_from is a list of files that were used to create a given file; for example, fastq file(s) will appear in the derived_from list of an alignments file. Processed file {ENCFF002CJM|/files/ENCFF002CJM/} is missing the requisite file specification in its derived_from list. |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000BQV | float |
TF_ChIP-seq_ENCSR000BQV |
TF_ChIP-seq ENCSR000BQV [biosample_summary="Homo sapiens H1" and target="SP4"]
|
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[32.9, 478] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 3236001 | 0.10% | 6137 |
| chr1 | 361215 | 0.15% | 686 |
| chr2 | 196501 | 0.08% | 371 |
| chr3 | 169458 | 0.09% | 311 |
| chr4 | 102448 | 0.05% | 190 |
| chr5 | 134664 | 0.07% | 245 |
| chr6 | 183740 | 0.11% | 339 |
| chr7 | 157866 | 0.10% | 289 |
| chr8 | 93476 | 0.06% | 174 |
| chr9 | 123804 | 0.09% | 235 |
| chr10 | 124532 | 0.09% | 233 |
| chr11 | 191426 | 0.14% | 360 |
| chr12 | 182086 | 0.14% | 347 |
| chr13 | 51026 | 0.04% | 92 |
| chr14 | 93813 | 0.09% | 177 |
| chr15 | 101779 | 0.10% | 192 |
| chr16 | 162872 | 0.18% | 315 |
| chr17 | 215788 | 0.26% | 412 |
| chr18 | 28308 | 0.04% | 51 |
| chr19 | 355530 | 0.61% | 726 |
| chr20 | 89628 | 0.14% | 164 |
| chr21 | 25962 | 0.06% | 52 |
| chr22 | 67069 | 0.13% | 132 |
| chrX | 23010 | 0.01% | 44 |
| 3343 contigs with no values (186304500 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 6137 | 2 | 1202 | 527.29 | 610 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF002CJM.bed.gz | 110.23 KB | 9feafb94ff370856471d807118f1d1f0 |
| ENCFF002CJM.tabix.bed.gz | 95.13 KB | 742cd80afd9b84f87f4f841b7fdea869 |
| ENCFF002CJM.tabix.bed.gz.tbi | 52.25 KB | e0c99c27f2889d2e004eb920f345aa8c |
| genomic_resource.yaml | 1.46 KB | 4fb070d6f171f538954504eb14845d1e |
| statistics/ |
