Resource

Id TF_ChIP-seq/ENCSR000BQUcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BQU [biosample_summary="Homo sapiens H1" and target="ATF2"]
Description
Labels
  • accession: ENCSR000BQU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003042/
  • biosample_summary: Homo sapiens H1
  • date_created: 2013-12-12T06:33:09.053290+00:00
  • date_released: 2012-02-29
  • doi: 10.17989/ENCSR000BQU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: ATF2

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BQU float

TF_ChIP-seq_ENCSR000BQU

TF_ChIP-seq ENCSR000BQU [biosample_summary="Homo sapiens H1" and target="ATF2"]
HISTOGRAM FOR TF_ChIP-seq_ENCSR000BQU [8.78, 456]
n
4,198,356
mean
43.9
sd
23.7

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 41983560.13% 10044
chr1 456318 0.18% 1134
chr2 287128 0.12% 688
chr3 269428 0.14% 649
chr4 187876 0.10% 453
chr5 248611 0.14% 578
chr6 325955 0.19% 782
chr7 232381 0.15% 523
chr8 161469 0.11% 377
chr9 162992 0.12% 383
chr10 163790 0.12% 369
chr11 245400 0.18% 606
chr12 234872 0.18% 556
chr13 79205 0.07% 178
chr14 125646 0.12% 310
chr15 119718 0.12% 285
chr16 146772 0.16% 346
chr17 216688 0.26% 542
chr18 65657 0.08% 145
chr19 221255 0.38% 550
chr20 89986 0.14% 219
chr21 22238 0.05% 50
chr22 80099 0.16% 191
chrX 54872 0.04% 130
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 10044 1 3115 418 570
global segment-length histogram

Files

Filename Size md5
ENCFF352KLD.bed.gz 148.77 KB f2d8da4f96ee322d13e45f9719c226d2
ENCFF352KLD.tabix.bed.gz 117.35 KB 0d3d7c8eb73b87de27f40ef5b7aab4cf
ENCFF352KLD.tabix.bed.gz.tbi 65.33 KB ed849127f56ff8097dcd161556a327a5
genomic_resource.yaml 1.54 KB 035f5ae7af562c50678a538aa55e0bc0
statistics/