Resource

Id TF_ChIP-seq/ENCSR000BQGcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BQG [biosample_summary="Homo sapiens H1" and target="SP2"]
Description
Labels
  • accession: ENCSR000BQG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003042/
  • biosample_summary: Homo sapiens H1
  • date_created: 2013-12-12T06:32:49.941068+00:00
  • date_released: 2012-02-29
  • doi: 10.17989/ENCSR000BQG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: SP2

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BQG float

TF_ChIP-seq_ENCSR000BQG
TF_ChIP-seq ENCSR000BQG [biosample_summary="Homo sapiens H1" and target="SP2"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000BQG [6.18, 550]
n
738,273
mean
89.9
sd
88.9

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 7382730.02% 2475
chr1 66487 0.03% 223
chr2 39647 0.02% 149
chr3 34830 0.02% 129
chr4 20097 0.01% 67
chr5 28966 0.02% 97
chr6 41925 0.02% 136
chr7 39276 0.02% 129
chr8 21413 0.01% 74
chr9 27845 0.02% 91
chr10 21871 0.02% 74
chr11 38132 0.03% 129
chr12 35648 0.03% 121
chr13 12872 0.01% 43
chr14 29943 0.03% 98
chr15 20795 0.02% 71
chr16 42864 0.05% 140
chr17 50818 0.06% 157
chr18 8744 0.01% 31
chr19 96697 0.16% 316
chr20 17531 0.03% 62
chr21 4999 0.01% 18
chr22 15734 0.03% 56
chrX 21139 0.01% 64
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 2475 8 773 298.29 376
global segment-length histogram

Files

Filename Size md5
ENCFF309QRC.bed.gz 40.79 KB 311e63beaf63314eefd174f6a749b8c3
ENCFF309QRC.tabix.bed.gz 30.29 KB 0f66781b26663b1cea16b3fc67a7fb18
ENCFF309QRC.tabix.bed.gz.tbi 26.98 KB 3216ac91d9331f00262f8f7dfb13da98
genomic_resource.yaml 4.17 KB d88ec7d9f47ea596040c9e4ddfab9d37
statistics/