Resource

Id TF_ChIP-seq/ENCSR000BPIcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BPI [biosample_summary="Homo sapiens HepG2" and target="POLR2AphosphoS5"]
Description
Labels
  • accession: ENCSR000BPI
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0001187/
  • biosample_summary: Homo sapiens HepG2
  • date_created: 2013-09-13T15:57:09.523871-08:00
  • date_released: 2012-02-29
  • doi: 10.17989/ENCSR000BPI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: POLR2AphosphoS5

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BPI float

TF_ChIP-seq_ENCSR000BPI
TF_ChIP-seq ENCSR000BPI [biosample_summary="Homo sapiens HepG2" and target="POLR2AphosphoS5"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000BPI [8.15, 483]
n
10,032,151
mean
72.3
sd
60.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 100321510.31% 32858
chr1 876023 0.35% 2917
chr2 972434 0.40% 3013
chr3 565005 0.28% 1839
chr4 298257 0.16% 922
chr5 345581 0.19% 1181
chr6 652487 0.38% 2061
chr7 412961 0.26% 1362
chr8 319191 0.22% 1078
chr9 377281 0.27% 1267
chr10 355902 0.27% 1208
chr11 502319 0.37% 1607
chr12 443399 0.33% 1483
chr13 140918 0.12% 462
chr14 426614 0.40% 1335
chr15 232710 0.23% 789
chr16 555872 0.62% 1851
chr17 739292 0.89% 2415
chr18 117267 0.15% 388
chr19 590978 1.01% 2044
chr20 529483 0.82% 1678
chr21 102452 0.22% 343
chr22 234437 0.46% 791
chrX 240838 0.15% 823
chrY 450 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 32858 1 9291 305.32 278
global segment-length histogram

Files

Filename Size md5
ENCFF061EOS.bed.gz 490.76 KB 27a1ee77f9d3729b9065eb836173ef26
ENCFF061EOS.tabix.bed.gz 377.76 KB b1e8fd53c6015aaab9f29e1142c4c543
ENCFF061EOS.tabix.bed.gz.tbi 122.91 KB 67339e7fd648c375297fcad01d2e1965
genomic_resource.yaml 1.88 KB 04b99ac755e83cebec031adf460e71f2
statistics/