Resource

Id TF_ChIP-seq/ENCSR000BMUcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BMU [biosample_summary="Homo sapiens H1" and target="POU5F1"]
Description
Labels
  • accession: ENCSR000BMU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003042/
  • biosample_summary: Homo sapiens H1
  • date_created: 2013-12-12T06:31:01.379759+00:00
  • date_released: 2011-07-18
  • doi: 10.17989/ENCSR000BMU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: POU5F1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BMU float

TF_ChIP-seq_ENCSR000BMU

TF_ChIP-seq ENCSR000BMU [biosample_summary="Homo sapiens H1" and target="POU5F1"]
HISTOGRAM FOR TF_ChIP-seq_ENCSR000BMU [15.8, 233]
n
855,651
mean
27.7
sd
14.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 8556510.03% 3997
chr1 76968 0.03% 360
chr2 70644 0.03% 328
chr3 59462 0.03% 279
chr4 52505 0.03% 246
chr5 52925 0.03% 246
chr6 64915 0.04% 303
chr7 51166 0.03% 240
chr8 43384 0.03% 203
chr9 34372 0.02% 160
chr10 41462 0.03% 195
chr11 37350 0.03% 174
chr12 44943 0.03% 209
chr13 32572 0.03% 152
chr14 26553 0.02% 124
chr15 24951 0.02% 116
chr16 25002 0.03% 118
chr17 26725 0.03% 125
chr18 20321 0.03% 96
chr19 15120 0.03% 70
chr20 18152 0.03% 85
chr21 7128 0.02% 33
chr22 8424 0.02% 39
chrX 19959 0.01% 93
chrY 648 <0.01% 3
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 3997 54 236 214.07 216
global segment-length histogram

Files

Filename Size md5
ENCFF002CJF.bed.gz 80.3 KB 2c019ef9ca5383733d5a63fa2ea9a677
ENCFF002CJF.tabix.bed.gz 61.82 KB e83db8a93945944a04cae7fd8ac59918
ENCFF002CJF.tabix.bed.gz.tbi 44.14 KB a848f68e471f60d6d9834d3891267d33
genomic_resource.yaml 1.47 KB eb7e87cbe2890461a93715ca187d2a59
statistics/