Resource

Id TF_ChIP-seq/ENCSR000BLKcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BLK [biosample_summary="Homo sapiens K562" and target="SRF"]
Description
Labels
  • accession: ENCSR000BLK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002067/
  • biosample_summary: Homo sapiens K562
  • date_created: 2013-09-13T16:01:02.330304-08:00
  • date_released: 2011-07-18
  • doi: 10.17989/ENCSR000BLK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: SRF

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BLK float

TF_ChIP-seq_ENCSR000BLK
TF_ChIP-seq ENCSR000BLK [biosample_summary="Homo sapiens K562" and target="SRF"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000BLK [16.8, 470]
n
897,312
mean
47
sd
56.7

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 8973120.03% 4718
chr1 119489 0.05% 628
chr2 56444 0.02% 298
chr3 45515 0.02% 239
chr4 28436 0.01% 150
chr5 34812 0.02% 186
chr6 65254 0.04% 345
chr7 58173 0.04% 305
chr8 32625 0.02% 170
chr9 32884 0.02% 176
chr10 35074 0.03% 184
chr11 49659 0.04% 262
chr12 42332 0.03% 218
chr13 9570 0.01% 49
chr14 17143 0.02% 91
chr15 26765 0.03% 140
chr16 43050 0.05% 225
chr17 44591 0.05% 229
chr18 12308 0.02% 65
chr19 63916 0.11% 341
chr20 24048 0.04% 126
chr21 10268 0.02% 56
chr22 29154 0.06% 152
chrX 15802 0.01% 83
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 4718 13 324 190.19 200
global segment-length histogram

Files

Filename Size md5
ENCFF002CMP.bed.gz 92.21 KB 4faa64e973c1fd4be5ecec209317dcc3
ENCFF002CMP.tabix.bed.gz 72.74 KB 3ef5ef081f284ed066c68cd6262fccda
ENCFF002CMP.tabix.bed.gz.tbi 47.07 KB 26ee2614428e0caeabb9199238df7c50
genomic_resource.yaml 1.47 KB 4fa16d4212b80024b319b78b8f89b044
statistics/