Resource

Id TF_ChIP-seq/ENCSR000BKMcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BKM [biosample_summary="Homo sapiens K562" and target="GATA2"]
Description
Labels
  • accession: ENCSR000BKM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002067/
  • biosample_summary: Homo sapiens K562
  • date_created: 2013-09-13T15:57:05.608557-08:00
  • date_released: 2011-07-18
  • doi: 10.17989/ENCSR000BKM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: GATA2

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BKM float

TF_ChIP-seq_ENCSR000BKM
TF_ChIP-seq ENCSR000BKM [biosample_summary="Homo sapiens K562" and target="GATA2"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000BKM [20.9, 447]
n
4,459,643
mean
62
sd
60.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 44596430.14% 19324
chr1 564437 0.23% 2439
chr2 349760 0.14% 1523
chr3 293901 0.15% 1262
chr4 181935 0.10% 790
chr5 224189 0.12% 973
chr6 365817 0.21% 1578
chr7 270440 0.17% 1157
chr8 193437 0.13% 843
chr9 149298 0.11% 648
chr10 201579 0.15% 876
chr11 239906 0.18% 1037
chr12 229953 0.17% 992
chr13 58476 0.05% 257
chr14 100092 0.09% 442
chr15 136098 0.13% 581
chr16 132364 0.15% 577
chr17 195534 0.23% 847
chr18 77147 0.10% 340
chr19 134971 0.23% 589
chr20 106042 0.16% 462
chr21 53600 0.11% 232
chr22 84560 0.17% 363
chrX 116107 0.07% 516
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 19324 36 762 230.78 256
global segment-length histogram

Files

Filename Size md5
ENCFF002CMA.bed.gz 370.44 KB 375a3d9a300928e6b93f233463063ae9
ENCFF002CMA.tabix.bed.gz 294.04 KB 0a38285f963c7c4a149d15430c927261
ENCFF002CMA.tabix.bed.gz.tbi 132.85 KB 7fddd2a974cc67ba81c5dde60f5be704
genomic_resource.yaml 1.47 KB e1aabddd0caf158aac32934557452498
statistics/