Resource

Id TF_ChIP-seq/ENCSR000BJZcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BJZ [biosample_summary="Homo sapiens GM12878" and target="BCLAF1"]
Description
Labels
  • accession: ENCSR000BJZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002784/
  • biosample_summary: Homo sapiens GM12878
  • date_created: 2013-09-13T15:57:46.202277-08:00
  • date_released: 2011-07-18
  • doi: 10.17989/ENCSR000BJZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: BCLAF1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BJZ float

TF_ChIP-seq_ENCSR000BJZ
TF_ChIP-seq ENCSR000BJZ [biosample_summary="Homo sapiens GM12878" and target="BCLAF1"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000BJZ [7.05, 347]
n
8,931,658
mean
40
sd
23.7

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 89316580.28% 25582
chr1 860923 0.35% 2446
chr2 701611 0.29% 2033
chr3 561737 0.28% 1578
chr4 355537 0.19% 1026
chr5 511136 0.28% 1483
chr6 668147 0.39% 1955
chr7 415771 0.26% 1189
chr8 355567 0.24% 1014
chr9 317135 0.23% 927
chr10 425866 0.32% 1206
chr11 448681 0.33% 1268
chr12 494256 0.37% 1410
chr13 199896 0.17% 571
chr14 313659 0.29% 915
chr15 292459 0.29% 841
chr16 330500 0.37% 940
chr17 467704 0.56% 1339
chr18 168612 0.21% 486
chr19 412163 0.70% 1199
chr20 230814 0.36% 641
chr21 98144 0.21% 281
chr22 165704 0.33% 461
chrX 135636 0.09% 373
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 25582 1 1846 349.14 430
global segment-length histogram

Files

Filename Size md5
ENCFF563QBC.bed.gz 375.84 KB dbc8a781e1fbe9d3923a0952f41aab3f
ENCFF563QBC.tabix.bed.gz 294.58 KB 4899e05de179d84b71dca1e57d7caef0
ENCFF563QBC.tabix.bed.gz.tbi 132.23 KB eb00952d1ac7a8386a8955564a2ff564
genomic_resource.yaml 1.85 KB 72ac73d5426130157997fd235f784c4e
statistics/