TF_ChIP-seq_ENCSR000BJK
TF_ChIP-seq ENCSR000BJK [biosample_summary="Homo sapiens HepG2" and target="GABPA"]
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| Id: | TF_ChIP-seq/ENCSR000BJK |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR000BJK [biosamplesummary="Homo sapiens HepG2" and target="GABPA"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN775XYN|/analyses/ENCAN775XYN/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_warning: Processed alignments file {ENCFF500QLL|/files/ENCFF500QLL/} processed by ChIP-seq ENCODE3 hg19 pipeline has 10324024 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting GABPA-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) audit_warning: Processed alignments file {ENCFF802GPW|/files/ENCFF802GPW/} processed by ChIP-seq ENCODE3 hg19 pipeline has 14907596 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting GABPA-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000BJK | float |
TF_ChIP-seq_ENCSR000BJK |
TF_ChIP-seq ENCSR000BJK [biosample_summary="Homo sapiens HepG2" and target="GABPA"]
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[3.68, 501] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF065EPE.bed.gz | 142.2 KB | fb8bebc60129799408d9866b62709e23 |
| ENCFF065EPE.bed.gz.dvc | 100.0 B | 0ec4d7f1357e4121a38846414cc6e74f |
| ENCFF065EPE.tabix.bed.gz | 99.97 KB | 6375e22b0f98268eb596df9808bdf11f |
| ENCFF065EPE.tabix.bed.gz.dvc | 106.0 B | 0278d17304569bb4ae7ac725888edf57 |
| ENCFF065EPE.tabix.bed.gz.tbi | 67.84 KB | 6b427ae5d7a22029137eddcbe7480aaa |
| ENCFF065EPE.tabix.bed.gz.tbi.dvc | 109.0 B | cef116790be1e8767afd3fe67fb9e5fb |
| genomic_resource.yaml | 2.33 KB | f2e06e3b28e6ff9e5dc0fa09e775470e |
| genomic_resource_original.yaml | 2.24 KB | c531b7f99e9f1e07ef7a4f27a081d2e9 |
| statistics/ |