TF_ChIP-seq_ENCSR000BIU
TF_ChIP-seq ENCSR000BIU [biosample_summary="Homo sapiens H1" and target="USF1"]
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| Id: | TF_ChIP-seq/ENCSR000BIU |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR000BIU [biosamplesummary="Homo sapiens H1" and target="USF1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN871BLK|/analyses/ENCAN871BLK/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_warning: Processed alignments file {ENCFF319RMX|/files/ENCFF319RMX/} processed by ChIP-seq ENCODE3 hg19 pipeline has 11505402 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting USF1-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) audit_warning: Processed alignments file {ENCFF410CQF|/files/ENCFF410CQF/} processed by ChIP-seq ENCODE3 hg19 pipeline has 12846454 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting USF1-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000BIU | float |
TF_ChIP-seq_ENCSR000BIU |
TF_ChIP-seq ENCSR000BIU [biosample_summary="Homo sapiens H1" and target="USF1"]
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[3.87, 535] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF358BEF.bed.gz | 515.36 KB | 3094c785a738fc27832b7fe913c3d950 |
| ENCFF358BEF.bed.gz.dvc | 100.0 B | f4d6795652735796ef4cda4ba7f90c29 |
| ENCFF358BEF.tabix.bed.gz | 358.74 KB | 43e1be8247c79d6ac7e73a7c90ae683b |
| ENCFF358BEF.tabix.bed.gz.dvc | 106.0 B | 4656ea9d67f2ea383beeed022c92c75e |
| ENCFF358BEF.tabix.bed.gz.tbi | 216.42 KB | 491fa1cb4974a8c63f0f2a26a8df7212 |
| ENCFF358BEF.tabix.bed.gz.tbi.dvc | 110.0 B | d8ed86732a4938779703b4714a2229ee |
| genomic_resource.yaml | 2.32 KB | c7341cd084ff96df884f9c160271497d |
| genomic_resource_original.yaml | 2.23 KB | c1e6f9cf65de450f612c0466d26922d9 |
| statistics/ |