Resource

Id TF_ChIP-seq/ENCSR000BIMcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BIM [biosample_summary="Homo sapiens GM12891" and target="TAF1"]
Description
Labels
  • accession: ENCSR000BIM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002785/
  • biosample_summary: Homo sapiens GM12891
  • date_created: 2013-09-13T16:00:33.383550-08:00
  • date_released: 2011-07-18
  • doi: 10.17989/ENCSR000BIM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: TAF1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BIM float

TF_ChIP-seq_ENCSR000BIM
TF_ChIP-seq ENCSR000BIM [biosample_summary="Homo sapiens GM12891" and target="TAF1"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000BIM [5.63, 427]
n
4,602,195
mean
37
sd
31.8

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 46021950.14% 16242
chr1 463134 0.19% 1665
chr2 336900 0.14% 1188
chr3 260140 0.13% 920
chr4 151865 0.08% 548
chr5 216592 0.12% 763
chr6 293579 0.17% 1013
chr7 212808 0.13% 735
chr8 167078 0.12% 594
chr9 181022 0.13% 646
chr10 196137 0.15% 681
chr11 235917 0.17% 828
chr12 257719 0.19% 910
chr13 91171 0.08% 316
chr14 161474 0.15% 575
chr15 151603 0.15% 554
chr16 192192 0.21% 671
chr17 263847 0.32% 909
chr18 76028 0.09% 267
chr19 308146 0.53% 1099
chr20 118428 0.18% 421
chr21 53454 0.11% 196
chr22 110972 0.22% 389
chrX 99413 0.06% 345
chrY 2576 <0.01% 9
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 16242 4 406 283.35 336
global segment-length histogram

Files

Filename Size md5
ENCFF501LDN.bed.gz 263.34 KB 18ebb93735f78d39b198d1f772d1e853
ENCFF501LDN.tabix.bed.gz 186.84 KB eccb74d903ba43f519c966ad690df5fc
ENCFF501LDN.tabix.bed.gz.tbi 91.13 KB 65ff2aed95711d3b28d674d756d6b9a5
genomic_resource.yaml 2.56 KB c5e6185c09c655170b1f45ead5bd0531
statistics/