Resource

Id TF_ChIP-seq/ENCSR000BHRcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BHR [biosample_summary="Homo sapiens HepG2" and target="ZBTB33"]
Description
Labels
  • accession: ENCSR000BHR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0001187/
  • biosample_summary: Homo sapiens HepG2
  • date_created: 2013-09-13T15:57:44.480679-08:00
  • date_released: 2011-07-18
  • doi: 10.17989/ENCSR000BHR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: ZBTB33

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BHR float

TF_ChIP-seq_ENCSR000BHR
TF_ChIP-seq ENCSR000BHR [biosample_summary="Homo sapiens HepG2" and target="ZBTB33"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000BHR [4.08, 470]
n
579,269
mean
52.4
sd
72.3

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 5792690.02% 2422
chr1 49230 0.02% 206
chr2 61033 0.03% 252
chr3 27409 0.01% 113
chr4 20363 0.01% 85
chr5 23378 0.01% 101
chr6 45145 0.03% 192
chr7 21597 0.01% 88
chr8 18772 0.01% 79
chr9 16757 0.01% 70
chr10 22341 0.02% 94
chr11 20249 0.01% 90
chr12 28976 0.02% 119
chr13 10353 0.01% 46
chr14 34261 0.03% 141
chr15 17305 0.02% 75
chr16 30089 0.03% 124
chr17 41442 0.05% 172
chr18 6538 0.01% 26
chr19 26451 0.05% 112
chr20 31236 0.05% 127
chr21 7266 0.02% 29
chr22 9091 0.02% 39
chrX 9987 0.01% 42
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 2422 23 450 239.17 256
global segment-length histogram

Files

Filename Size md5
ENCFF787GZD.bed.gz 45.12 KB c633aba44ab9e0caf255c5a858c743d4
ENCFF787GZD.tabix.bed.gz 29.36 KB af85033d5f69603a20b4b3f1dda49b1e
ENCFF787GZD.tabix.bed.gz.tbi 27.7 KB f3e6007f0935c399ea427612d32f4982
genomic_resource.yaml 2.57 KB 373144e48ed10fce457c3845e16858ed
statistics/