Resource

Id TF_ChIP-seq/ENCSR000BGXcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BGX [biosample_summary="Homo sapiens K562" and target="SIX5"]
Description
Labels
  • accession: ENCSR000BGX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002067/
  • biosample_summary: Homo sapiens K562
  • date_created: 2013-09-13T15:58:26.500558-08:00
  • date_released: 2011-07-18
  • doi: 10.17989/ENCSR000BGX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: SIX5

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BGX float

TF_ChIP-seq_ENCSR000BGX
TF_ChIP-seq ENCSR000BGX [biosample_summary="Homo sapiens K562" and target="SIX5"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000BGX [4.23, 386]
n
769,578
mean
55.2
sd
60.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 7695780.02% 3492
chr1 82926 0.03% 365
chr2 40295 0.02% 189
chr3 35140 0.02% 156
chr4 17284 0.01% 80
chr5 23986 0.01% 109
chr6 38697 0.02% 174
chr7 41687 0.03% 184
chr8 20345 0.01% 92
chr9 30723 0.02% 143
chr10 23186 0.02% 104
chr11 37952 0.03% 181
chr12 35908 0.03% 164
chr13 7826 0.01% 35
chr14 13308 0.01% 60
chr15 18186 0.02% 79
chr16 43947 0.05% 201
chr17 37595 0.05% 169
chr18 8700 0.01% 38
chr19 91392 0.16% 442
chr20 28288 0.04% 131
chr21 8982 0.02% 39
chr22 65005 0.13% 280
chrX 18220 0.01% 77
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 3492 6 508 220.38 250
global segment-length histogram

Files

Filename Size md5
ENCFF742ZHT.bed.gz 58.67 KB 5ea58f1ab62c3f9c839f1d95b10650e8
ENCFF742ZHT.tabix.bed.gz 41.92 KB 2228226f42c38fc41cdbe86d1cb07983
ENCFF742ZHT.tabix.bed.gz.tbi 35.5 KB 2d9a9e1b09108819396a74475d01d0e4
genomic_resource.yaml 2.55 KB c2b123f4c5757ad54af9b88ad12f926a
statistics/