Resource

Id TF_ChIP-seq/ENCSR000BGPcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BGP [biosample_summary="Homo sapiens GM12878" and target="POU2F2"]
Description
Labels
  • accession: ENCSR000BGP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002784/
  • biosample_summary: Homo sapiens GM12878
  • date_created: 2013-09-13T16:01:54.170917-08:00
  • date_released: 2011-07-18
  • doi: 10.17989/ENCSR000BGP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: POU2F2

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BGP float

TF_ChIP-seq_ENCSR000BGP
TF_ChIP-seq ENCSR000BGP [biosample_summary="Homo sapiens GM12878" and target="POU2F2"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000BGP [33.8, 736]
n
6,478,243
mean
63.4
sd
49.7

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 64782430.20% 23031
chr1 624904 0.25% 2209
chr2 494000 0.20% 1761
chr3 376591 0.19% 1350
chr4 249140 0.13% 891
chr5 344481 0.19% 1226
chr6 440433 0.26% 1531
chr7 316577 0.20% 1111
chr8 263287 0.18% 941
chr9 237103 0.17% 846
chr10 293362 0.22% 1047
chr11 327689 0.24% 1170
chr12 359375 0.27% 1276
chr13 132319 0.12% 475
chr14 212551 0.20% 763
chr15 233624 0.23% 827
chr16 242126 0.27% 858
chr17 364159 0.44% 1275
chr18 126778 0.16% 458
chr19 327210 0.56% 1163
chr20 175441 0.27% 633
chr21 79229 0.17% 301
chr22 136834 0.27% 489
chrX 121030 0.08% 430
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 23031 2 2475 281.28 320
global segment-length histogram

Files

Filename Size md5
ENCFF002CHP.bed.gz 514.08 KB a7b42064e6a428752010ce2ce7493414
ENCFF002CHP.tabix.bed.gz 350.43 KB d9a306a73c9f11802778c6bfe1455654
ENCFF002CHP.tabix.bed.gz.tbi 147.23 KB bc68f640d57d3113cd411c70e7652d1d
genomic_resource.yaml 1.48 KB a068b479d2cb755ba434f29e8e783d17
statistics/