TF_ChIP-seq_ENCSR000BGF
TF_ChIP-seq ENCSR000BGF [biosample_summary="Homo sapiens GM12878" and target="REST"]
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| Id: | TF_ChIP-seq/ENCSR000BGF |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR000BGF [biosamplesummary="Homo sapiens GM12878" and target="REST"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN288AYC|/analyses/ENCAN288AYC/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_not_compliant: Processed alignments file {ENCFF386AHN|/files/ENCFF386AHN/} processed by ChIP-seq ENCODE3 hg19 pipeline has 9538328 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting REST-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) audit_warning: Processed alignments file {ENCFF259SJI|/files/ENCFF259SJI/} processed by ChIP-seq ENCODE3 hg19 pipeline has 11780978 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting REST-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000BGF | float |
TF_ChIP-seq_ENCSR000BGF |
TF_ChIP-seq ENCSR000BGF [biosample_summary="Homo sapiens GM12878" and target="REST"]
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[3.24, 457] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF048JKT.bed.gz | 101.65 KB | 821185bde94cd93d206c629d07774040 |
| ENCFF048JKT.bed.gz.dvc | 100.0 B | 2bf43c1296687a287a650e3d68017dae |
| ENCFF048JKT.tabix.bed.gz | 69.07 KB | 51fe44f6a0d9f25a7bd9fcf7397f2f41 |
| ENCFF048JKT.tabix.bed.gz.dvc | 105.0 B | e9a5eaba66ac49f05fbbe26531749192 |
| ENCFF048JKT.tabix.bed.gz.tbi | 53.44 KB | 8c08b5af6fb153af8f01a124e0fbb21e |
| ENCFF048JKT.tabix.bed.gz.tbi.dvc | 109.0 B | 650f9e268a7b1126ab4c3fdda66eb21f |
| genomic_resource.yaml | 2.48 KB | d5cd53f2a15b150429f7728b7bb8eebc |
| genomic_resource_original.yaml | 2.39 KB | 238eedcf50289e2584fffd9487b5d1e2 |
| statistics/ |