Resource
| Id | TF_ChIP-seq/ENCSR000AVE |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | TF_ChIP-seq ENCSR000AVE [biosample_summary="Homo sapiens K562" and target="WHSC1"] |
| Description |
status: released biological_replicates: Rep 1 summary: output_type: pseudoreplicated IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN351TWG|/analyses/ENCAN351TWG/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_internal_action: File {ENCFF157ZQI|/files/ENCFF157ZQI/} with status 'released' is derived from file {ENCFF419RSJ|/files/ENCFF419RSJ/} with status 'archived'. |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000AVE | float |
TF_ChIP-seq_ENCSR000AVE |
TF_ChIP-seq ENCSR000AVE [biosample_summary="Homo sapiens K562" and target="WHSC1"]
|
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[5.76, 65.7] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 592439 | 0.02% | 2218 |
| chr1 | 93295 | 0.04% | 353 |
| chr2 | 11850 | <0.01% | 43 |
| chr3 | 21685 | 0.01% | 75 |
| chr4 | 7817 | <0.01% | 27 |
| chr5 | 12845 | 0.01% | 50 |
| chr6 | 60114 | 0.04% | 229 |
| chr7 | 55769 | 0.03% | 204 |
| chr8 | 11080 | 0.01% | 39 |
| chr9 | 17543 | 0.01% | 68 |
| chr10 | 30788 | 0.02% | 109 |
| chr11 | 13522 | 0.01% | 51 |
| chr12 | 6284 | <0.01% | 22 |
| chr13 | 608 | <0.01% | 2 |
| chr14 | 2128 | <0.01% | 7 |
| chr15 | 10686 | 0.01% | 47 |
| chr16 | 19167 | 0.02% | 72 |
| chr17 | 12488 | 0.01% | 45 |
| chr18 | 8992 | 0.01% | 32 |
| chr19 | 10243 | 0.02% | 35 |
| chr20 | 8762 | 0.01% | 34 |
| chr21 | 8913 | 0.02% | 32 |
| chr22 | 166141 | 0.33% | 635 |
| chrUn_KI270442v1 | 304 | 0.08% | 1 |
| chrX | 1415 | <0.01% | 6 |
| 3342 contigs with no values (185912439 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 2218 | 5 | 304 | 267.11 | 304 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF157ZQI.bed.gz | 36.76 KB | 1ba35432577e2284a365aab8265aab2a |
| ENCFF157ZQI.tabix.bed.gz | 25.42 KB | 228f3525566d5f62ddab8994ab05153e |
| ENCFF157ZQI.tabix.bed.gz.tbi | 15.98 KB | 5b004f6e1265cdb9df6add6cc02f856a |
| genomic_resource.yaml | 1.54 KB | 21b576c53339869bbbd1faecb14f8260 |
| statistics/ |
