Resource

Id TF_ChIP-seq/ENCSR000ATYcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000ATY [biosample_summary="Homo sapiens K562" and target="NCOR1"]
Description
Labels
  • accession: ENCSR000ATY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002067/
  • biosample_summary: Homo sapiens K562
  • date_created: 2013-11-07T22:16:16.264499+00:00
  • date_released: 2012-08-06
  • doi: 10.17989/ENCSR000ATY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: NCOR1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000ATY float

TF_ChIP-seq_ENCSR000ATY
TF_ChIP-seq ENCSR000ATY [biosample_summary="Homo sapiens K562" and target="NCOR1"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000ATY [2.1, 93.1]
n
189,006
mean
16.9
sd
9.55

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1890060.01% 620
chr1 30745 0.01% 103
chr2 9503 <0.01% 30
chr3 8530 <0.01% 30
chr4 3330 <0.01% 9
chr5 9882 0.01% 31
chr6 20026 0.01% 70
chr7 9868 0.01% 33
chr8 8679 0.01% 27
chr9 8948 0.01% 27
chr10 5031 <0.01% 15
chr11 6126 <0.01% 20
chr12 9918 0.01% 33
chr13 2488 <0.01% 8
chr14 2960 <0.01% 8
chr15 4561 <0.01% 18
chr16 8342 0.01% 24
chr17 5383 0.01% 16
chr18 4311 0.01% 16
chr19 8586 0.01% 31
chr20 5019 0.01% 15
chr21 5233 0.01% 16
chr22 8146 0.02% 28
chrX 3391 <0.01% 12
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 620 33 370 304.85 370
global segment-length histogram

Files

Filename Size md5
ENCFF816AEF.bed.gz 9.78 KB 35f47b4111c68ca1831fb368ab591416
ENCFF816AEF.tabix.bed.gz 7.42 KB d7bd1b2525a4a0b7a82a0d5847488ebd
ENCFF816AEF.tabix.bed.gz.tbi 9.45 KB f148ff30ea9ab549a9a3c3ee418e0b89
genomic_resource.yaml 3.94 KB 39e302857a134b8d961250c444b23f0c
statistics/