Resource

Id TF_ChIP-seq/ENCSR000ATTcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000ATT [biosample_summary="Homo sapiens K562" and target="CREBBP"]
Description
Labels
  • accession: ENCSR000ATT
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002067/
  • biosample_summary: Homo sapiens K562
  • date_created: 2013-11-07T22:16:14.375546+00:00
  • date_released: 2012-08-06
  • doi: 10.17989/ENCSR000ATT
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: CREBBP

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000ATT float

TF_ChIP-seq_ENCSR000ATT
TF_ChIP-seq ENCSR000ATT [biosample_summary="Homo sapiens K562" and target="CREBBP"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000ATT [3.14, 87.8]
n
185,138
mean
16.3
sd
7.36

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1851380.01% 818
chr1 27391 0.01% 119
chr2 6915 <0.01% 30
chr3 7568 <0.01% 35
chr4 5368 <0.01% 24
chr5 6316 <0.01% 28
chr6 14829 0.01% 68
chr7 18136 0.01% 78
chr8 6844 <0.01% 29
chr9 4248 <0.01% 18
chr10 11560 0.01% 52
chr11 7018 0.01% 31
chr12 8045 0.01% 35
chr13 4956 <0.01% 21
chr14 1248 <0.01% 6
chr15 2427 <0.01% 11
chr16 7080 0.01% 30
chr17 6762 0.01% 32
chr18 2902 <0.01% 13
chr19 9168 0.02% 40
chr20 2802 <0.01% 13
chr21 9876 0.02% 43
chr22 9903 0.02% 46
chrX 3776 <0.01% 16
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 818 12 236 226.33 236
global segment-length histogram

Files

Filename Size md5
ENCFF532VPN.bed.gz 13.6 KB 1303ae8e875e1334ba083f640bdb00ce
ENCFF532VPN.tabix.bed.gz 9.76 KB 655630ce53793bd831a81dc44ba9339f
ENCFF532VPN.tabix.bed.gz.tbi 12.77 KB d94f89781f45e10a526fcc2d7aeb163b
genomic_resource.yaml 3.38 KB 56f54478951c43c9c774ad68e08d6548
statistics/