Resource

Id Histone_ChIP-seq/ENCSR994NPKcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR994NPK [biosample_summary="Homo sapiens cardiac muscle cell originated from RUES2" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR994NPK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/in_vitro_differentiated_cells_CL_0000746/
  • biosample_summary: Homo sapiens cardiac muscle cell originated from RUES2
  • date_created: 2016-10-18T22:32:18.244887+00:00
  • date_released: 2016-11-12
  • doi: 10.17989/ENCSR994NPK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: embryo
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR994NPK float

Histone_ChIP-seq_ENCSR994NPK
Histone_ChIP-seq ENCSR994NPK [biosample_summary="Homo sapiens cardiac muscle cell originated from RUES2" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR994NPK [1.55, 6.89]
n
72,070,995
mean
3.19
sd
0.715

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 720709952.24% 85980
chr1 8053725 3.23% 9119
chr2 6105441 2.52% 7009
chr3 4699896 2.37% 5690
chr4 3200050 1.68% 3901
chr5 4161617 2.29% 4570
chr6 3359832 1.97% 3981
chr7 3294711 2.07% 4108
chr8 2462680 1.70% 3032
chr9 2686390 1.94% 3451
chr10 3384932 2.53% 3919
chr11 3553755 2.63% 4022
chr12 4117284 3.09% 4813
chr13 1465621 1.28% 1825
chr14 2578582 2.41% 2982
chr15 2838163 2.78% 3418
chr16 2578441 2.85% 3057
chr17 3920708 4.71% 4747
chr18 1416647 1.76% 1733
chr19 2934378 5.01% 3880
chr20 1899995 2.95% 2329
chr21 743972 1.59% 935
chr22 1567025 3.08% 1967
chrX 1047150 0.67% 1492
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 85980 203 35095 838.23 600
global segment-length histogram

Files

Filename Size md5
ENCFF883XUP.bed.gz 1.71 MB 166956291fd7f0ede48f2fc00aa91e1a
ENCFF883XUP.tabix.bed.gz 870.11 KB 3882d1a2349136225ab41d7a35ae5fa5
ENCFF883XUP.tabix.bed.gz.tbi 145.0 KB 40618dfdcf43e476138dbe01f217790b
genomic_resource.yaml 1.71 KB 2f64c60edb90b942d180e69a20e1b124
statistics/