Resource

Id Histone_ChIP-seq/ENCSR991BTYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR991BTY [biosample_summary="Homo sapiens H1" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR991BTY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003042/
  • biosample_summary: Homo sapiens H1
  • date_created: 2015-09-15T20:27:05.274074+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR991BTY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment: This experiment’s alignments have been cropped to 50nt for consistency against its control experiment.
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR991BTY float

Histone_ChIP-seq_ENCSR991BTY
Histone_ChIP-seq ENCSR991BTY [biosample_summary="Homo sapiens H1" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR991BTY [1.81, 14.6]
n
37,329,501
mean
5.3
sd
1.52

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 373295011.16% 83194
chr1 3685031 1.48% 7853
chr2 3078830 1.27% 6935
chr3 2774896 1.40% 6231
chr4 1834062 0.96% 4328
chr5 2277509 1.25% 5150
chr6 2488810 1.46% 5572
chr7 2007984 1.26% 4596
chr8 1838148 1.27% 4193
chr9 1626308 1.18% 3625
chr10 1994868 1.49% 4377
chr11 1980373 1.47% 4301
chr12 1854652 1.39% 4208
chr13 1049833 0.92% 2467
chr14 1181996 1.10% 2616
chr15 1363890 1.34% 2897
chr16 1155484 1.28% 2481
chr17 1262753 1.52% 2701
chr18 1046642 1.30% 2369
chr19 511773 0.87% 1142
chr20 950884 1.48% 2072
chr21 334857 0.72% 777
chr22 602422 1.19% 1251
chrX 413682 0.27% 1013
chrY 13814 0.02% 39
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 83194 165 3327 448.7 386
global segment-length histogram

Files

Filename Size md5
ENCFF832KQP.bed.gz 1.66 MB 9860ba7a25fd01e655c4593e8eb15cc4
ENCFF832KQP.tabix.bed.gz 825.91 KB 2258d93e35105d1a6a6dadffd07bdb1c
ENCFF832KQP.tabix.bed.gz.tbi 346.07 KB 49fbdb8ec1274a9aeedb03fdf18c74b6
genomic_resource.yaml 2.2 KB c39786d015d4b2bca463e777443009a4
statistics/