Resource

Id Histone_ChIP-seq/ENCSR989PTScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR989PTS [biosample_summary="Homo sapiens heart left ventricle tissue male adult (40 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR989PTS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002084/
  • biosample_summary: Homo sapiens heart left ventricle tissue male adult (40 years)
  • date_created: 2020-05-01T02:45:29.250722+00:00
  • date_released: 2020-09-15
  • doi: 10.17989/ENCSR989PTS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (40 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR989PTS float

Histone_ChIP-seq_ENCSR989PTS
Histone_ChIP-seq ENCSR989PTS [biosample_summary="Homo sapiens heart left ventricle tissue male adult (40 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR989PTS [1.79, 48.3]
n
73,745,846
mean
9.71
sd
6.66

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 737458462.29% 55353
chr1 7286717 2.93% 5276
chr2 5465883 2.26% 4248
chr3 4823526 2.43% 3670
chr4 2898369 1.52% 2333
chr5 3855132 2.12% 2902
chr6 4011029 2.35% 3084
chr7 3334346 2.09% 2599
chr8 3029486 2.09% 2435
chr9 3243868 2.34% 2409
chr10 4075250 3.05% 3028
chr11 3763335 2.79% 2702
chr12 3947907 2.96% 2809
chr13 1792123 1.57% 1443
chr14 2362322 2.21% 1795
chr15 2619651 2.57% 1987
chr16 2599415 2.88% 1932
chr17 4011283 4.82% 2806
chr18 1409374 1.75% 1135
chr19 3217882 5.49% 2279
chr20 2112811 3.28% 1558
chr21 753357 1.61% 587
chr22 1981344 3.90% 1346
chrX 1115257 0.71% 963
chrY 36179 0.06% 27
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 55353 210 29064 1332.28 974
global segment-length histogram

Files

Filename Size md5
ENCFF007OIY.bed.gz 1.25 MB 564968478b867696ad94b9c49e627383
ENCFF007OIY.tabix.bed.gz 592.35 KB 9923c03f52edbff78d781405fa279ce0
ENCFF007OIY.tabix.bed.gz.tbi 208.84 KB c925e2607a3a6e773983a697a85eef9c
genomic_resource.yaml 1.74 KB 0ce902bb31c2a3b1ac50ed6a985155f6
statistics/