Resource

Id Histone_ChIP-seq/ENCSR988JLNcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR988JLN [biosample_summary="Homo sapiens heart left ventricle tissue female adult (53 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR988JLN
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002084/
  • biosample_summary: Homo sapiens heart left ventricle tissue female adult (53 years)
  • date_created: 2016-10-19T23:11:35.623900+00:00
  • date_released: 2016-11-03
  • doi: 10.17989/ENCSR988JLN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR988JLN float

Histone_ChIP-seq_ENCSR988JLN
Histone_ChIP-seq ENCSR988JLN [biosample_summary="Homo sapiens heart left ventricle tissue female adult (53 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR988JLN [1.63, 13.9]
n
20,095,836
mean
5.22
sd
1.99

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 200958360.62% 15728
chr1 1772363 0.71% 1404
chr2 1393803 0.58% 916
chr3 644915 0.33% 488
chr4 737493 0.39% 515
chr5 1031059 0.57% 709
chr6 1277764 0.75% 917
chr7 1064897 0.67% 673
chr8 698626 0.48% 539
chr9 765570 0.55% 587
chr10 968787 0.72% 652
chr11 813256 0.60% 633
chr12 934721 0.70% 702
chr13 429670 0.38% 268
chr14 649335 0.61% 458
chr15 516336 0.51% 385
chr16 647551 0.72% 521
chr17 1262785 1.52% 899
chr18 290769 0.36% 231
chr19 1421448 2.42% 1056
chr20 778454 1.21% 615
chr21 223275 0.48% 187
chr22 423408 0.83% 397
chrM 13733 82.88% 6
chrX 1333124 0.85% 1965
chrY 2694 <0.01% 5
3341 contigs with no values (129060516 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 15728 220 35115 1277.71 759
global segment-length histogram

Files

Filename Size md5
ENCFF614LBC.bed.gz 310.01 KB 5036950d37d6419affe6223d3bb55997
ENCFF614LBC.tabix.bed.gz 159.76 KB 629bed07580bc82c9562cdd6adf63f7f
ENCFF614LBC.tabix.bed.gz.tbi 79.71 KB 6d1b7774b55aba4efcbdf9b66741da55
genomic_resource.yaml 1.54 KB 602cb33337b1aa78162071e495092e66
statistics/