Resource

Id Histone_ChIP-seq/ENCSR982PLJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR982PLJ [biosample_summary="Homo sapiens Peyer''s patch tissue female adult (53 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR982PLJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001211/
  • biosample_summary: Homo sapiens Peyer's patch tissue female adult (53 years)
  • date_created: 2016-10-22T16:10:41.706444+00:00
  • date_released: 2016-11-03
  • doi: 10.17989/ENCSR982PLJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR982PLJ float

Histone_ChIP-seq_ENCSR982PLJ
Histone_ChIP-seq ENCSR982PLJ [biosample_summary="Homo sapiens Peyer''s patch tissue female adult (53 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR982PLJ [1.24, 13.1]
n
834,575
mean
3.39
sd
0.635

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 8345750.03% 1591
chr1 88706 0.04% 164
chr2 78023 0.03% 138
chr3 37484 0.02% 75
chr4 25519 0.01% 51
chr5 33794 0.02% 71
chr6 48646 0.03% 94
chr7 42486 0.03% 83
chr8 32673 0.02% 59
chr9 41549 0.03% 78
chr10 44217 0.03% 81
chr11 36596 0.03% 76
chr12 35217 0.03% 70
chr13 20817 0.02% 39
chr14 22008 0.02% 43
chr15 25778 0.03% 46
chr16 24533 0.03% 46
chr17 60618 0.07% 100
chr18 13076 0.02% 31
chr19 52128 0.09% 97
chr20 25779 0.04% 51
chr21 8416 0.02% 17
chr22 20863 0.04% 38
chr22_KI270733v1_random 769 0.43% 2
chrUn_KI270467v1 665 16.96% 1
chrX 14215 0.01% 40
3341 contigs with no values (186120808 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 1591 208 1859 524.56 450
global segment-length histogram

Files

Filename Size md5
ENCFF205CDA.bed.gz 28.92 KB bd2a79c0568f9deb38f6db766de2c2c9
ENCFF205CDA.tabix.bed.gz 15.87 KB a25e46e7a88472c7934f715bc0c8ce85
ENCFF205CDA.tabix.bed.gz.tbi 17.8 KB 64032c952c71927f97adaedc4db87104
genomic_resource.yaml 2.0 KB f73d89d17d7778fbc4e2f9bf7db13482
statistics/