Resource

Id Histone_ChIP-seq/ENCSR981USFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR981USF [biosample_summary="Homo sapiens spleen tissue female adult (61 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR981USF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002106/
  • biosample_summary: Homo sapiens spleen tissue female adult (61 years)
  • date_created: 2021-01-28T22:01:54.723295+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR981USF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (61 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR981USF float

Histone_ChIP-seq_ENCSR981USF
Histone_ChIP-seq ENCSR981USF [biosample_summary="Homo sapiens spleen tissue female adult (61 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR981USF [1.77, 47.8]
n
37,505,434
mean
16.5
sd
7.97

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 375054341.17% 23470
chr1 3718291 1.49% 2372
chr2 2582218 1.07% 1583
chr3 2092086 1.06% 1271
chr4 1486621 0.78% 893
chr5 1793185 0.99% 1051
chr6 2197993 1.29% 1289
chr7 1869180 1.17% 1219
chr8 1360894 0.94% 842
chr9 1547263 1.12% 986
chr10 1593456 1.19% 1007
chr11 2085526 1.54% 1254
chr12 1982207 1.49% 1192
chr13 755493 0.66% 469
chr14 1242354 1.16% 754
chr15 1222631 1.20% 764
chr16 1462669 1.62% 922
chr17 2251472 2.70% 1382
chr18 607295 0.76% 393
chr19 2419737 4.13% 1640
chr20 957096 1.49% 623
chr21 357466 0.77% 236
chr22 852280 1.68% 561
chrX 1068021 0.68% 767
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 23470 210 12311 1598.02 1405
global segment-length histogram

Files

Filename Size md5
ENCFF378UVY.bed.gz 561.66 KB 72f30acf39d053747f07651ad72c5148
ENCFF378UVY.tabix.bed.gz 260.95 KB 6ccbbfbe9b3d049662789279abb9c912
ENCFF378UVY.tabix.bed.gz.tbi 147.53 KB fd7e19b36d3b44680f7133134f15f88b
genomic_resource.yaml 1.49 KB ebe760fea8f8002bfc3a2e19c3777192
statistics/