Resource

Id Histone_ChIP-seq/ENCSR981TFLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR981TFL [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR981TFL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-04-30T04:17:59.461382+00:00
  • date_released: 2022-01-06
  • doi: 10.17989/ENCSR981TFL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (90 or above years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR981TFL float

Histone_ChIP-seq_ENCSR981TFL
Histone_ChIP-seq ENCSR981TFL [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR981TFL [1.92, 47.1]
n
55,853,710
mean
18.3
sd
9.38

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 558537101.74% 34547
chr1 5451788 2.19% 3288
chr2 3945293 1.63% 2467
chr3 3403515 1.72% 1984
chr4 2370322 1.25% 1439
chr5 2915403 1.61% 1741
chr6 3259503 1.91% 1999
chr7 2735924 1.72% 1802
chr8 2251693 1.55% 1380
chr9 2254748 1.63% 1460
chr10 2427873 1.81% 1509
chr11 3009405 2.23% 1782
chr12 3008352 2.26% 1757
chr13 1303150 1.14% 838
chr14 1787405 1.67% 1065
chr15 1747922 1.71% 1117
chr16 2076249 2.30% 1359
chr17 2925245 3.51% 1812
chr18 1059132 1.32% 683
chr19 3192530 5.45% 2071
chr20 1390939 2.16% 868
chr21 531513 1.14% 332
chr22 1215560 2.39% 780
chrX 1590246 1.02% 1014
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 34547 190 32987 1616.75 1136
global segment-length histogram

Files

Filename Size md5
ENCFF686AFC.bed.gz 843.38 KB 1c23ebda720ec1892dd4b6936dc5faf6
ENCFF686AFC.tabix.bed.gz 382.77 KB 026411d72da84b7f9a2b180ece384417
ENCFF686AFC.tabix.bed.gz.tbi 190.86 KB af088d42c4603fa1796c9602859f79eb
genomic_resource.yaml 1.61 KB cc8b2d98f2edc89c51f091fc27eb6070
statistics/