Resource

Id Histone_ChIP-seq/ENCSR979OTMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR979OTM [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR979OTM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-08-25T18:07:30.068556+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR979OTM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR979OTM float

Histone_ChIP-seq_ENCSR979OTM
Histone_ChIP-seq ENCSR979OTM [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR979OTM [1.68, 11.8]
n
40,216,625
mean
4.37
sd
1.65

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 402166251.25% 47509
chr1 1322004 0.53% 1278
chr2 1363429 0.56% 1231
chr3 526711 0.27% 517
chr4 845902 0.44% 786
chr5 1045466 0.58% 871
chr6 1542737 0.90% 1243
chr7 991907 0.62% 787
chr8 737556 0.51% 746
chr9 613303 0.44% 571
chr10 1089336 0.81% 1064
chr11 595655 0.44% 601
chr12 898519 0.67% 803
chr13 490706 0.43% 471
chr14 981905 0.92% 1027
chr15 716667 0.70% 829
chr16 758191 0.84% 855
chr17 1220954 1.47% 1097
chr18 357185 0.44% 392
chr19 742321 1.27% 833
chr20 657862 1.02% 722
chr21 439591 0.94% 506
chr22 279629 0.55% 370
chrX 21998748 14.10% 29908
chrY 341 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 47509 205 35204 846.51 598
global segment-length histogram

Files

Filename Size md5
ENCFF710FUW.bed.gz 857.48 KB a6c4cfc18e46f60b3278d109dbfdec5b
ENCFF710FUW.tabix.bed.gz 453.7 KB d7d4f9c96f11932565ab781e7987ca4d
ENCFF710FUW.tabix.bed.gz.tbi 108.84 KB d1d51313e88ee9053ac241dd54c3440d
genomic_resource.yaml 1.62 KB aa47ffb383d2ab33a460b8e6b7459cf4
statistics/