Resource

Id Histone_ChIP-seq/ENCSR975GDLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR975GDL [biosample_summary="Homo sapiens left lung tissue male adult (40 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR975GDL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002168/
  • biosample_summary: Homo sapiens left lung tissue male adult (40 years)
  • date_created: 2020-05-01T02:05:57.548264+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR975GDL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (40 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR975GDL float

Histone_ChIP-seq_ENCSR975GDL
Histone_ChIP-seq ENCSR975GDL [biosample_summary="Homo sapiens left lung tissue male adult (40 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR975GDL [1.55, 35.5]
n
101,087,754
mean
9.63
sd
7.63

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1010877543.14% 60088
chr1 10687351 4.29% 6467
chr2 6317177 2.61% 3818
chr3 3360003 1.69% 2056
chr4 3352312 1.76% 1713
chr5 5063169 2.79% 2795
chr6 5009096 2.93% 2625
chr7 4616898 2.90% 2547
chr8 4423487 3.05% 2592
chr9 4458206 3.22% 2615
chr10 5374808 4.02% 3313
chr11 5234927 3.88% 3330
chr12 5171726 3.88% 3120
chr13 2154218 1.88% 1230
chr14 3285699 3.07% 2085
chr15 3228858 3.17% 2124
chr16 3811837 4.22% 2361
chr17 6494893 7.80% 3706
chr18 1658106 2.06% 1091
chr19 6499298 11.09% 3663
chr20 5402628 8.38% 3364
chr21 1040572 2.23% 699
chr22 3481440 6.85% 2282
chrX 932767 0.60% 472
chrY 28278 0.05% 20
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 60088 245 137925 1682.33 945
global segment-length histogram

Files

Filename Size md5
ENCFF608JQT.bed.gz 1.22 MB 04651935e79affc27ed8be43b5ee4539
ENCFF608JQT.tabix.bed.gz 612.26 KB 204cbd74c8777f697abc227382ca69dd
ENCFF608JQT.tabix.bed.gz.tbi 158.53 KB b78f614859a789998bcea581fdd16aae
genomic_resource.yaml 1.71 KB 2a50fa2780fece5bb49d723e32d1e393
statistics/