Resource

Id Histone_ChIP-seq/ENCSR972GGWcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR972GGW [biosample_summary="Homo sapiens BLaER1 3 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR972GGW
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 3 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:51:14.143098+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR972GGW
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 3 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR972GGW float

Histone_ChIP-seq_ENCSR972GGW
Histone_ChIP-seq ENCSR972GGW [biosample_summary="Homo sapiens BLaER1 3 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR972GGW [1.24, 78.1]
n
86,642,411
mean
12.5
sd
11

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 866424112.69% 80119
chr1 7848625 3.15% 7255
chr1_KI270713v1_random 711 1.74% 1
chr2 6507585 2.69% 6038
chr3 4661686 2.35% 4324
chr3_GL000221v1_random 568 0.37% 1
chr4 3241423 1.70% 3129
chr4_GL000008v2_random 308 0.15% 1
chr5 4383500 2.41% 3921
chr6 4520976 2.65% 4068
chr7 4361844 2.74% 4235
chr8 3718488 2.56% 3460
chr9 3707152 2.68% 3464
chr9_KI270718v1_random 250 0.66% 1
chr10 4115841 3.08% 3797
chr11 3862659 2.86% 3500
chr11_KI270721v1_random 2155 2.15% 5
chr12 4250744 3.19% 3854
chr13 2165018 1.89% 1970
chr14 2952885 2.76% 2645
chr14_GL000009v2_random 267 0.13% 1
chr14_GL000194v1_random 861 0.45% 1
chr14_GL000225v1_random 2029 0.96% 5
chr14_KI270723v1_random 848 2.22% 1
chr14_KI270726v1_random 1385 3.17% 3
chr15 2742510 2.69% 2563
chr15_KI270727v1_random 1910 0.43% 4
chr16 3830597 4.24% 3583
chr16_KI270728v1_random 965 0.05% 2
chr17 4990825 5.99% 4403
chr17_GL000205v2_random 14361 7.74% 12
chr18 1821466 2.27% 1752
chr19 4384589 7.48% 4066
chr20 2821700 4.38% 2650
chr21 1354158 2.90% 1246
chr22 2343561 4.61% 2240
chr22_KI270733v1_random 587 0.33% 2
chrUn_GL000195v1 1363 0.75% 4
chrUn_GL000216v2 2411 1.37% 2
chrUn_GL000219v1 2514 1.40% 2
chrUn_GL000220v1 255 0.16% 1
chrUn_GL000224v1 2135 1.19% 3
chrUn_KI270438v1 557 0.50% 2
chrUn_KI270442v1 281 0.07% 1
chrUn_KI270519v1 888 0.64% 2
chrUn_KI270742v1 326 0.17% 1
chrUn_KI270744v1 3156 1.87% 3
chrUn_KI270753v1 2506 3.98% 3
chrX 2005082 1.28% 1882
chrY 5900 0.01% 10
3317 contigs with no values (123219245 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 80119 250 30994 1081.42 567
global segment-length histogram

Files

Filename Size md5
ENCFF893ASJ.bed.gz 1.89 MB 8584f7db86d33c85729079cd6a379a04
ENCFF893ASJ.tabix.bed.gz 863.94 KB 2fd7eeafc520e078a1c3fc450bb644f9
ENCFF893ASJ.tabix.bed.gz.tbi 245.58 KB 464a3cc10c188144704cfd508b73326f
genomic_resource.yaml 3.11 KB 2c347c95ad382b1290c1c46d371b2927
statistics/