Resource

Id Histone_ChIP-seq/ENCSR969DAFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR969DAF [biosample_summary="Homo sapiens peripheral blood mononuclear cell male adult (27 years)" and target="H3K9ac"]
Description
Labels
  • accession: ENCSR969DAF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_2000001/
  • biosample_summary: Homo sapiens peripheral blood mononuclear cell male adult (27 years)
  • date_created: 2015-09-15T20:26:54.511057+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR969DAF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (27 years)
  • status: released
  • submitter_comment:
  • target: H3K9ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR969DAF float

Histone_ChIP-seq_ENCSR969DAF
Histone_ChIP-seq ENCSR969DAF [biosample_summary="Homo sapiens peripheral blood mononuclear cell male adult (27 years)" and target="H3K9ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR969DAF [1.89, 27.6]
n
26,804,141
mean
6.96
sd
3.44

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 268041410.83% 58707
chr1 2862716 1.15% 6324
chr1_KI270713v1_random 1167 2.86% 6
chr2 1836887 0.76% 3962
chr3 1498793 0.76% 3334
chr4 829570 0.44% 1747
chr5 1217805 0.67% 2571
chr6 1529961 0.90% 3255
chr7 1148173 0.72% 2576
chr8 867051 0.60% 1923
chr9 1101069 0.80% 2503
chr10 1099435 0.82% 2480
chr11 1591450 1.18% 3352
chr12 1419029 1.06% 2970
chr13 505303 0.44% 1113
chr14 1022615 0.96% 2216
chr14_GL000194v1_random 135 0.07% 1
chr15 886559 0.87% 2027
chr16 1182015 1.31% 2590
chr17 1802768 2.17% 3936
chr17_GL000205v2_random 1709 0.92% 3
chr18 357703 0.45% 804
chr19 1719733 2.93% 3516
chr20 781210 1.21% 1837
chr21 276129 0.59% 656
chr22 799521 1.57% 1902
chrUn_GL000219v1 1559 0.87% 4
chrX 444503 0.28% 1058
chrY 19573 0.03% 41
3338 contigs with no values (128480082 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 58707 135 7041 456.57 294
global segment-length histogram

Files

Filename Size md5
ENCFF041HXM.bed.gz 1.12 MB 681f7831cf81e3ff8a190d182b55a9b6
ENCFF041HXM.tabix.bed.gz 578.98 KB 73b580872c17661edb5a6833ee0c612b
ENCFF041HXM.tabix.bed.gz.tbi 204.14 KB c720dd37163cb8118e239fd4edd2fe93
genomic_resource.yaml 1.55 KB ca1720f363cdd40efbd6f2344071e67a
statistics/