Resource

Id Histone_ChIP-seq/ENCSR963TKBcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR963TKB [biosample_summary="Homo sapiens natural killer cell male adult (21 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR963TKB
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000623/
  • biosample_summary: Homo sapiens natural killer cell male adult (21 years)
  • date_created: 2015-09-16T21:42:04.137477+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR963TKB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (21 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR963TKB float

Histone_ChIP-seq_ENCSR963TKB
Histone_ChIP-seq ENCSR963TKB [biosample_summary="Homo sapiens natural killer cell male adult (21 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR963TKB [1.78, 74.3]
n
91,469,891
mean
13.3
sd
8.72

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 914698912.84% 102078
chr1 8920865 3.58% 9998
chr1_KI270712v1_random 193 0.11% 1
chr1_KI270713v1_random 1187 2.91% 2
chr2 6705944 2.77% 7860
chr3 4843027 2.44% 5969
chr4 2528510 1.33% 3355
chr5 3793009 2.09% 4682
chr6 4869481 2.85% 5999
chr7 4118020 2.58% 4954
chr8 3330747 2.29% 3977
chr9 3841211 2.78% 3981
chr10 4404997 3.29% 4873
chr11 5029494 3.72% 5130
chr12 4180909 3.14% 4951
chr13 1597799 1.40% 2149
chr14 3339103 3.12% 3640
chr15 3084912 3.02% 3467
chr16 4389378 4.86% 4206
chr17 5986338 7.19% 5716
chr17_GL000205v2_random 2846 1.53% 3
chr18 1491314 1.86% 1896
chr19 5734879 9.78% 5270
chr20 2974994 4.62% 3102
chr21 1064309 2.28% 1227
chr22 2970353 5.85% 2683
chr22_KI270733v1_random 337 0.19% 1
chrUn_GL000195v1 1680 0.92% 2
chrUn_GL000219v1 3443 1.92% 5
chrX 2165029 1.39% 2828
chrY 95583 0.17% 151
3336 contigs with no values (128132840 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 102078 190 18521 896.08 624
global segment-length histogram

Files

Filename Size md5
ENCFF969CIV.bed.gz 2.45 MB 050022a812cb40fe3e9630f4dba0056f
ENCFF969CIV.tabix.bed.gz 1.07 MB 668c309c61fdaa03d8f4db31bd3809c5
ENCFF969CIV.tabix.bed.gz.tbi 255.66 KB 1ba74be1b3e2f0ebc7913d7915ddc96b
genomic_resource.yaml 1.99 KB c0bd513471a3e51ba58cc7fed335ecc0
statistics/