Resource

Id Histone_ChIP-seq/ENCSR957LSBcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR957LSB [biosample_summary="Homo sapiens heart right ventricle tissue female adult (59 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR957LSB
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002080/
  • biosample_summary: Homo sapiens heart right ventricle tissue female adult (59 years)
  • date_created: 2021-08-25T18:06:45.508237+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR957LSB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (59 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR957LSB float

Histone_ChIP-seq_ENCSR957LSB
Histone_ChIP-seq ENCSR957LSB [biosample_summary="Homo sapiens heart right ventricle tissue female adult (59 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR957LSB [1.76, 47.4]
n
39,082,972
mean
17.6
sd
8.8

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 390829721.21% 23482
chr1 3885349 1.56% 2325
chr2 2651313 1.09% 1562
chr3 2226454 1.12% 1288
chr4 1574398 0.83% 879
chr5 1909241 1.05% 1065
chr6 2260159 1.32% 1301
chr7 1930235 1.21% 1200
chr8 1511407 1.04% 895
chr9 1633354 1.18% 1003
chr10 1704710 1.27% 1006
chr11 2087192 1.55% 1233
chr12 2057800 1.54% 1152
chr13 827507 0.72% 493
chr14 1255938 1.17% 771
chr15 1261685 1.24% 761
chr16 1495514 1.66% 959
chr17 2257616 2.71% 1371
chr18 685188 0.85% 400
chr19 2464166 4.20% 1655
chr20 1019551 1.58% 629
chr21 358560 0.77% 222
chr22 873211 1.72% 554
chrX 1142942 0.73% 749
chrY 9482 0.02% 9
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 23482 258 14770 1664.38 1466
global segment-length histogram

Files

Filename Size md5
ENCFF042VLY.bed.gz 639.64 KB 983227707361c6eff8947b9ac1e2514a
ENCFF042VLY.tabix.bed.gz 275.39 KB 30b455d3d39126d1b24405055b46e6a0
ENCFF042VLY.tabix.bed.gz.tbi 150.16 KB 4c2083a82a8fba15ffd5fc7ec840bd58
genomic_resource.yaml 1.54 KB f964eaa87407e06e9f8f52220c91b282
statistics/