Resource

Id Histone_ChIP-seq/ENCSR957BPJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR957BPJ [biosample_summary="Homo sapiens aorta tissue male adult (34 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR957BPJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000947/
  • biosample_summary: Homo sapiens aorta tissue male adult (34 years)
  • date_created: 2015-10-01T07:16:06.670771+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR957BPJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (34 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR957BPJ float

Histone_ChIP-seq_ENCSR957BPJ
Histone_ChIP-seq ENCSR957BPJ [biosample_summary="Homo sapiens aorta tissue male adult (34 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR957BPJ [1.67, 25]
n
22,746,971
mean
6.95
sd
2.9

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 227469710.71% 29773
chr1 2241646 0.90% 2872
chr2 1680080 0.69% 2116
chr3 1462466 0.74% 1842
chr4 1144916 0.60% 1434
chr5 1169056 0.64% 1481
chr6 1473946 0.86% 1936
chr7 1086515 0.68% 1409
chr8 906566 0.62% 1201
chr9 936131 0.68% 1249
chr10 1051014 0.79% 1336
chr11 1198721 0.89% 1548
chr12 1255307 0.94% 1600
chr13 543262 0.48% 694
chr14 712804 0.67% 908
chr15 771520 0.76% 946
chr16 738465 0.82% 1049
chr17 1078651 1.30% 1470
chr18 438408 0.55% 529
chr19 1063573 1.81% 1630
chr20 518900 0.81% 674
chr21 211881 0.45% 275
chr22 398868 0.78% 547
chr22_KI270733v1_random 182 0.10% 1
chrUn_GL000219v1 965 0.54% 2
chrX 636476 0.41% 990
chrY 26652 0.05% 34
3340 contigs with no values (128718115 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 29773 175 8824 764.01 581
global segment-length histogram

Files

Filename Size md5
ENCFF223WWD.bed.gz 705.48 KB cf0e021fafaa74cf9d1fb4efb1c10974
ENCFF223WWD.tabix.bed.gz 320.99 KB 06b1612d230804533c432e3f27ec00c9
ENCFF223WWD.tabix.bed.gz.tbi 150.11 KB f6a98afee876d939c2e0ad96595563a4
genomic_resource.yaml 1.96 KB 8cda502f4e230966014ea4ec80dfff98
statistics/