Resource

Id Histone_ChIP-seq/ENCSR955XFLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR955XFL [biosample_summary="Homo sapiens trophoblast tissue female embryo (40 weeks)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR955XFL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000088/
  • biosample_summary: Homo sapiens trophoblast tissue female embryo (40 weeks)
  • date_created: 2017-03-22T16:17:01.669947+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR955XFL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (40 weeks)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR955XFL float

Histone_ChIP-seq_ENCSR955XFL
Histone_ChIP-seq ENCSR955XFL [biosample_summary="Homo sapiens trophoblast tissue female embryo (40 weeks)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR955XFL [1.43, 24.4]
n
54,664,695
mean
5.36
sd
2.64

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 546646951.70% 72136
chr1 5842264 2.35% 7463
chr2 4568970 1.89% 6158
chr3 4158361 2.10% 5411
chr4 2660924 1.40% 3665
chr5 3184303 1.75% 4375
chr6 3905087 2.29% 5283
chr7 2847671 1.79% 3804
chr8 2503411 1.72% 3380
chr9 2598156 1.88% 3302
chr10 2690028 2.01% 3502
chr11 2853504 2.11% 3657
chr12 2907630 2.18% 3721
chr13 1396217 1.22% 1966
chr14 1774742 1.66% 2211
chr15 1857181 1.82% 2488
chr16 1191297 1.32% 1573
chr17 1806271 2.17% 2378
chr18 1147875 1.43% 1533
chr19 1311673 2.24% 1683
chr20 1317191 2.04% 1630
chr21 665364 1.42% 904
chr22 845807 1.66% 1046
chrM 1098 6.63% 3
chrX 629367 0.40% 999
chrY 303 <0.01% 1
3341 contigs with no values (129060516 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 72136 220 13500 757.8 548
global segment-length histogram

Files

Filename Size md5
ENCFF957FGY.bed.gz 1.48 MB afbb55d3965f96c17f1e9633951aa791
ENCFF957FGY.tabix.bed.gz 721.9 KB 4b356cd61d5b89a7c06a21b2e30abdad
ENCFF957FGY.tabix.bed.gz.tbi 231.71 KB 977541e249e998e0c117989c3ece7659
genomic_resource.yaml 1.51 KB 24910a937a2340627609178a6a114b26
statistics/