Resource

Id Histone_ChIP-seq/ENCSR955OBNcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR955OBN [biosample_summary="Homo sapiens neurosphere female embryo (17 weeks) originated from cortex" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR955OBN
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_NTR_0000427/
  • biosample_summary: Homo sapiens neurosphere female embryo (17 weeks) originated from cortex
  • date_created: 2015-09-15T20:27:15.651613+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR955OBN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (17 weeks)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR955OBN float

Histone_ChIP-seq_ENCSR955OBN
Histone_ChIP-seq ENCSR955OBN [biosample_summary="Homo sapiens neurosphere female embryo (17 weeks) originated from cortex" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR955OBN [1.5, 21.4]
n
47,125,927
mean
5.87
sd
3.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 471259271.46% 80145
chr1 5088417 2.04% 8566
chr2 3073516 1.27% 5400
chr3 2397058 1.21% 4509
chr4 1666976 0.88% 2501
chr5 2378069 1.31% 3858
chr6 2466647 1.44% 4081
chr7 2318157 1.45% 3617
chr8 1511385 1.04% 2551
chr9 2135908 1.54% 3702
chr10 2733622 2.04% 4410
chr11 3171314 2.35% 5522
chr12 2077591 1.56% 3379
chr13 751045 0.66% 1318
chr14 1503781 1.40% 2597
chr15 1956075 1.92% 3497
chr16 1686098 1.87% 2878
chr17 2718659 3.27% 4149
chr18 742554 0.92% 1362
chr19 1366089 2.33% 1953
chr20 2428843 3.77% 4278
chr21 455628 0.98% 810
chr22 1243220 2.45% 2350
chrX 1255275 0.80% 2857
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 80145 165 60148 588.01 347
global segment-length histogram

Files

Filename Size md5
ENCFF312JWJ.bed.gz 1.34 MB 5730dcb27ed8ac998c30faccb16b1430
ENCFF312JWJ.tabix.bed.gz 736.82 KB aceead3854016022c784f98735bedfe7
ENCFF312JWJ.tabix.bed.gz.tbi 166.79 KB 1ab6ba74efeaadfbb686a3437235c19f
genomic_resource.yaml 2.06 KB 540d92595af80a934428e6b0a76ad952
statistics/