Resource

Id Histone_ChIP-seq/ENCSR954IGQcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR954IGQ [biosample_summary="Homo sapiens testis tissue male adult (54 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR954IGQ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000473/
  • biosample_summary: Homo sapiens testis tissue male adult (54 years)
  • date_created: 2017-12-06T21:06:41.095907+00:00
  • date_released: 2019-08-01
  • doi: 10.17989/ENCSR954IGQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR954IGQ float

Histone_ChIP-seq_ENCSR954IGQ
Histone_ChIP-seq ENCSR954IGQ [biosample_summary="Homo sapiens testis tissue male adult (54 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR954IGQ [1.6, 40]
n
88,288,398
mean
7.2
sd
4.9

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 882883982.74% 60891
chr1 8627307 3.47% 5832
chr2 6763443 2.79% 4726
chr3 5669805 2.86% 3956
chr4 3481895 1.83% 2540
chr5 4206160 2.32% 2928
chr6 5139717 3.01% 3601
chr7 4255336 2.67% 3051
chr8 3748956 2.58% 2572
chr9 4096759 2.96% 2771
chr10 4378403 3.27% 3082
chr11 4502186 3.33% 2883
chr12 4652999 3.49% 3078
chr13 1889390 1.65% 1370
chr14 3263850 3.05% 2191
chr15 3126104 3.07% 2156
chr16 3152173 3.49% 2313
chr17 4610664 5.54% 3039
chr18 1796587 2.24% 1300
chr19 3815835 6.51% 2473
chr20 2581645 4.01% 1783
chr21 1044063 2.24% 730
chr22 1926119 3.79% 1286
chrX 1522533 0.98% 1205
chrY 36469 0.06% 25
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 60891 225 34342 1449.94 1039
global segment-length histogram

Files

Filename Size md5
ENCFF032CSL.bed.gz 1.41 MB 05ab914e9c9a5e405bba563c94553683
ENCFF032CSL.tabix.bed.gz 660.83 KB 5b9eb9a72eb84de722cd924d2517af81
ENCFF032CSL.tabix.bed.gz.tbi 226.77 KB cd07e5728b6972b9d5f1783d301eb1e4
genomic_resource.yaml 1.7 KB fb111a862daec1cbcab738b23b3f4d55
statistics/