Resource

Id Histone_ChIP-seq/ENCSR953HJNcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR953HJN [biosample_summary="Homo sapiens layer of hippocampus tissue male adult (81 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR953HJN
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002305/
  • biosample_summary: Homo sapiens layer of hippocampus tissue male adult (81 years)
  • date_created: 2015-09-15T19:49:18.544311+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR953HJN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (81 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR953HJN float

Histone_ChIP-seq_ENCSR953HJN
Histone_ChIP-seq ENCSR953HJN [biosample_summary="Homo sapiens layer of hippocampus tissue male adult (81 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR953HJN [1.88, 10.6]
n
5,441,511
mean
4.63
sd
1.22

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 54415110.17% 9663
chr1 339074 0.14% 620
chr2 372704 0.15% 716
chr3 253923 0.13% 498
chr4 318663 0.17% 590
chr5 382602 0.21% 671
chr6 238185 0.14% 467
chr7 307914 0.19% 560
chr8 252460 0.17% 462
chr9 209122 0.15% 370
chr10 259572 0.19% 473
chr11 194283 0.14% 373
chr12 293415 0.22% 499
chr13 125328 0.11% 245
chr14 136894 0.13% 262
chr15 153041 0.15% 254
chr16 209191 0.23% 382
chr17 116861 0.14% 215
chr18 101290 0.13% 204
chr19 838710 1.43% 1178
chr20 129369 0.20% 254
chr21 104530 0.22% 176
chr22 59551 0.12% 111
chrX 23064 0.01% 44
chrY 21765 0.04% 39
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 9663 250 7441 563.13 480
global segment-length histogram

Files

Filename Size md5
ENCFF886QLM.bed.gz 173.63 KB 678d0b713317f6a089d7eea4f208e124
ENCFF886QLM.tabix.bed.gz 95.67 KB 9fd85e33a514778e595d93f3e7ed6d05
ENCFF886QLM.tabix.bed.gz.tbi 72.87 KB e1113f6e830bd2159e1ddb4b76e72419
genomic_resource.yaml 1.53 KB ec43b4acaa29f372511289256955c57c
statistics/