Resource

Id Histone_ChIP-seq/ENCSR952EIDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR952EID [biosample_summary="Homo sapiens thymus tissue male child (3 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR952EID
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002370/
  • biosample_summary: Homo sapiens thymus tissue male child (3 years)
  • date_created: 2015-10-01T07:16:58.633548+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR952EID
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male child (3 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR952EID float

Histone_ChIP-seq_ENCSR952EID
Histone_ChIP-seq ENCSR952EID [biosample_summary="Homo sapiens thymus tissue male child (3 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR952EID [2.02, 13.2]
n
22,399,773
mean
5.77
sd
2.01

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 223997730.70% 30377
chr1 2095904 0.84% 3107
chr2 1680636 0.69% 2086
chr3 911680 0.46% 1289
chr4 899662 0.47% 1139
chr5 1193953 0.66% 1577
chr6 1313139 0.77% 2028
chr7 1165361 0.73% 1560
chr8 894715 0.62% 1230
chr9 1146196 0.83% 1530
chr10 1153474 0.86% 1502
chr11 1184941 0.88% 1537
chr12 1022503 0.77% 1380
chr13 498640 0.44% 653
chr14 761410 0.71% 1032
chr15 789549 0.77% 1047
chr16 849970 0.94% 1045
chr17 1426237 1.71% 1942
chr18 443922 0.55% 565
chr19 1259677 2.15% 1642
chr20 776162 1.20% 1041
chr21 189817 0.41% 264
chr22 569548 1.12% 829
chrX 170962 0.11% 346
chrY 1715 <0.01% 6
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 30377 185 16064 737.39 413
global segment-length histogram

Files

Filename Size md5
ENCFF641CCT.bed.gz 568.47 KB ce71928245878dc5f7fe354b53c7bb82
ENCFF641CCT.tabix.bed.gz 301.53 KB 24fcb2427f9100687dc1533a2d562918
ENCFF641CCT.tabix.bed.gz.tbi 90.86 KB 24f4a4fc836fea901d918dc69e06e0c9
genomic_resource.yaml 2.19 KB 33c7d3b39d439b690f2c2562cb51a0c2
statistics/