Resource

Id Histone_ChIP-seq/ENCSR949OYZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR949OYZ [biosample_summary="Homo sapiens psoas muscle tissue male adult (34 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR949OYZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008450/
  • biosample_summary: Homo sapiens psoas muscle tissue male adult (34 years)
  • date_created: 2015-10-01T07:16:08.088141+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR949OYZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (34 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR949OYZ float

Histone_ChIP-seq_ENCSR949OYZ
Histone_ChIP-seq ENCSR949OYZ [biosample_summary="Homo sapiens psoas muscle tissue male adult (34 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR949OYZ [1.57, 66]
n
37,060,350
mean
21.9
sd
11

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 370603501.15% 26838
chr1 3589734 1.44% 2588
chr1_KI270712v1_random 1834 1.04% 4
chr1_KI270713v1_random 573 1.41% 2
chr2 2599751 1.07% 1838
chr3 2147501 1.08% 1541
chr4 1574848 0.83% 1131
chr5 1798491 0.99% 1248
chr6 2226533 1.30% 1602
chr7 1828799 1.15% 1361
chr8 1429606 0.98% 1028
chr9 1507681 1.09% 1083
chr10 1659695 1.24% 1195
chr11 1939693 1.44% 1379
chr12 1949060 1.46% 1363
chr13 801292 0.70% 578
chr14 1207100 1.13% 838
chr15 1186281 1.16% 851
chr16 1358757 1.50% 1005
chr17 2046512 2.46% 1485
chr17_GL000205v2_random 1976 1.06% 1
chr18 677571 0.84% 462
chr19 2229052 3.80% 1820
chr20 928125 1.44% 663
chr21 354252 0.76% 265
chr22 786390 1.55% 582
chrM 6278 37.89% 7
chrUn_GL000219v1 2983 1.66% 3
chrUn_GL000220v1 207 0.13% 1
chrX 1179298 0.76% 887
chrY 40477 0.07% 27
3336 contigs with no values (128317137 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 26838 185 10976 1380.89 1175.5
global segment-length histogram

Files

Filename Size md5
ENCFF783HFC.bed.gz 754.64 KB a7b878690f1d688c359c5f3149df6c27
ENCFF783HFC.tabix.bed.gz 315.11 KB a960482b635b9c1b7b917b93b613f9cd
ENCFF783HFC.tabix.bed.gz.tbi 160.46 KB b2178ff328ff251f724145422ff749a9
genomic_resource.yaml 1.98 KB cd1595ab1796e8bb6917c7038dcc6617
statistics/